Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2991 ATGGATCATCTACAACATCAAGAGATGGTAGACATTGAGTCACAAACCGTGGAAATCCCTGACATACTCCACAAAGGAAAACGTCAAGTGATTCTTAAGTTTGATAACGTTGTGTATAAAATTAAGACCAAGAAAGGTGGAGTATTTGTGAAGAACAAAGAGACAGAAGAGAAAGAGATACTGAAGGGAGTGAAAGGTGTTGTTGAGCCTGGTGAAATGCTAGCCATGTTAGGTCCATCTGGGAGTGGCAAAACAACTCTACTCACAGCATTGGGAGGAAGGCTTAGAGGGAAGCTTTATGGAAGCATAACTTACAATGGTGAAGCCTTCTCAAATTCCATGAAGAGGAACACTGGCTTTGTCACACAAGATGATGTTCTCTACCCTCACTTGACTGTGACTGAGACCCTAGTCTTCACTGCACTTCTCAGGTTGCCCAACACTATCTCCAAAGAAGAGAAAGTTAAGAAAGCAAAAGATGTTATTGATCAACTTGGTTTAACCAAGTGCAAGGATAGCATAGTTGGAAGCCCTTTCTTGAGGGGGGTTTCTGGGGGTGAGAGAAAGAGGGTTAGCATTGGACAAGAAATGCTCATAAACCCAAGCTTGTTGTTTCTTGATGAACCTACCTCTGGCCTAGACTCAACCACAGCACAAAGAATTGTCTCAACTTTGTGGGAGCTTGCATGTGGAGGAAGAACTATTGTGATGACTATACACCAACCTTCAAGTAGACTTTACTACTTGTTTCATAAGGTGTTGTTGCTATCAGAAGGGAACTCATTGTATTTTGGAAAGGGATCTGAAGCCATTGAATACTTCTCTAACATTGGATATGCCCCAGCCTTGGCCATGAACCCTGCAGACTTCCTTTTGGATCTTGCAAACGGTATCTACACTGATGAATCTAATACGGATCATGCCATAGATAAACAAAAATTGGTTTCGATGTGTAAGATAAACTGTGCTGCTCAATTGAAGCCAGCAGCACTTGAAGGAATCAATGACTCTAGTAAAAGCCAGAATAGATTTCAAGAAAAGGGCTCCGAAAAATGGCCTACCAGCTGGTCTCAGCAATTCACTGTGTTGTTAAGAAGAGACATCAAAGAGAGAAGGCATGAATCATTCTCTGCTTTGCGGGTTGCTCAGGTCTTTGTGGTTGCTCTTATTTCAGGACTACTGTGGTATAAGTCTGATATCTCACACTTACAGGATCAGATTGGGCTTCTATTCTTCATATCCGGCTTTTGGGGTTTCTTCCCTCTCTTTCAAGCAATTTTCACCTTTCCCCAAGAGCTATTGATGCTAGAGAAAGAAAGATCTTCTGGAATGTACCGGCTTTCATCATACTTTATGTCAAGGGTGGTAGCTGACCTTCCCATGGAACTTAGTCTTCCCACCATATTTATTCTCATAACCTATTGGATGGCAGGGTTGAAAGGCAAACTGCTCAACTTCTTATACACATTGCTCACCCTCTTACTCCACGTCTTAGTCTCACAAGGCCTTGGCCTCGCCCTCGGCGCTACTGTGATGGACCAAAAAGCTGCAACCACACTTGCCTCAGTGCTCATGCTGTGTTTCTTGCTTGCTGGTGGTTTTTATGTTCAGCATGTTCCAGTGTTTATTTCATGGGTGAAGTACATTTCCATCAACTACTACAACTACCAGCTCTTTATCGCGTCTCAATATAGCGATGGCGAGGCATACCCTTGTTCTACTGGCCAGTGTCAAGTTGCCGAATTTCCTTCTATAAAGCAAACAGGGTTTCATTTCAATCTGCAAGAGCAAGTCATGGCTGCATCAGCTCTTGTGATAATGATGATAGGTTACAGACTTATAGCCTATGTTGCTCTCATGAGGATTGGAGTGACAAAGAAATAG 1884 0.4273 MDHLQHQEMVDIESQTVEIPDILHKGKRQVILKFDNVVYKIKTKKGGVFVKNKETEEKEILKGVKGVVEPGEMLAMLGPSGSGKTTLLTALGGRLRGKLYGSITYNGEAFSNSMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNTISKEEKVKKAKDVIDQLGLTKCKDSIVGSPFLRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQRIVSTLWELACGGRTIVMTIHQPSSRLYYLFHKVLLLSEGNSLYFGKGSEAIEYFSNIGYAPALAMNPADFLLDLANGIYTDESNTDHAIDKQKLVSMCKINCAAQLKPAALEGINDSSKSQNRFQEKGSEKWPTSWSQQFTVLLRRDIKERRHESFSALRVAQVFVVALISGLLWYKSDISHLQDQIGLLFFISGFWGFFPLFQAIFTFPQELLMLEKERSSGMYRLSSYFMSRVVADLPMELSLPTIFILITYWMAGLKGKLLNFLYTLLTLLLHVLVSQGLGLALGATVMDQKAATTLASVLMLCFLLAGGFYVQHVPVFISWVKYISINYYNYQLFIASQYSDGEAYPCSTGQCQVAEFPSIKQTGFHFNLQEQVMAASALVIMMIGYRLIAYVALMRIGVTKK* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2991 627 Pfam ABC-2 type transporter 358 564 IPR013525 GO:0016020|GO:0140359
Gso11g2991 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 32 283 IPR003439 GO:0005524
Gso11g2991 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 623 - -
Gso11g2991 627 SMART AAA_5 70 268 IPR003593 -
Gso11g2991 627 Pfam ABC transporter 61 211 IPR003439 GO:0005524
Gso11g2991 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 19 623 - -
Gso11g2991 627 Gene3D - 49 277 IPR027417 -
Gso11g2991 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 276 IPR027417 -
Gso11g2991 627 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2991 Gso-Chr11 45742225 45746267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2991 68 297 Calmodulin-binding Proteins AT2G36910 28.452 3.59e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2991 K05681 - gmx:100816135 1180.62