Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2955 ATGGAACTTGAGATACGTGTTTGTCTCTTGTTGTTTCTCTTTGGTATACTCTCTGGCTCTCAAGCCTACACGTTCTATGTTGGTGGAAAAGATGGGTGGGTTTTGTACCCTTCTGAGAATTACAATCACTGGGCTGAAAGGATGAGGTTCCAAGTTAGTGACACTCTTGTTTTTAAGTACAAGAAGGACTCAGATACTGTGTTGGTGGTGAACAATGATGATTATGAGAAATGTAACAAGAAGAACCCGATCAAGAAGTTTGAGGATGGTGACTCGGAGTTTCAGTTTGATAGATCGGGTCCATTTTACTTCATTAGTGGGAAAGATGATAATTGTGAGAAGGGTCAGAAATTGATTATTGTGGTGTTGGCTGTGAGAGAGCCACCTCCTTATTATTCTCCGACACCTCCAAACACTCCTTACGTTCCAATTACTCCTCCAAAAGCACCTTATCATCCAAATCCACCTTATGTTCCAACCCCTCCAAACACTCCTTATGTTCCAATTACTCCTCCGAGAGCACCTTATGTTCCAGCACCTCCTCAAACTCCAACTGTTCCAACTCCTCCAGAAACTCCTTATCATCCACCCTATGTTCCAATACCTCCTCCTAAAACACCTTCACCTATTTCCAGCCCTCCCTATGTTCATCCAAAACCACCTTCACCTATTCATTATCCACCTAATGTTCCAACACCTCCAAAAACTCCTTCCCCTGTATACACTCCTCCCAATGTTCCCACTCAAGCACCTTCACCTGCTAATCATCCTCCATATATTCCAACTCCTCCACAAACTCCTTCCCCAGTTTATACTCCTCCTAATTTTCCAACGCCTCCAAAAATACCCTCTCCTGTGTACACTCCCCCAAAAGCTCCTTCCCCTAGTAACAATCCACCCTATGTTCCTACACCTCCAAAAACACCTTCTCCTTCTTATAATCCTCCTAATGTTCCCACTCCTCCCAAAACACCTTCACCTATTTACACTCCACCAAATGTTCCTACTCCTCCAAAAACACCATCTCCTGCTTATAGTCCTCCAAATGCTCCTTCCCCTCATAACCAACCTCCCTATGTTCCTACACCTCCAAAAACACCTTCTCCTTCTTATAATCCTCCTAATGTTCCCACTCCTCCCAAAACACCTTCACCTATTTACACTCCACCAAATGTTCCTACTCCTCCAAAAACACCATCTCCTGCTTATAGTCCTCCAAATGCTCCTTCCCCTCATAACCAACCTCCCTATGTTCCTACACCACCAAAGACACCTTCTCCAATTTATAGTCCTCCTAATGTTCCCACTCCTCCCAAAACACCTTCACCTATTTACACTCCACCAAATGTTCCTACTCCTCCAAAAACACCATCTCCTGCTTATAGTCCTCCAAATGCTCCTTCCCCTCATAACCAACCTCCCTATGTTCCTACACCTCCAAAAACACCTTCTCCTTCTTATAATCCTCCTAATGTTCCCACTCCTCCCAAAACACCTTCACCTATTTACACTCCACCAAATGTTCCTACTCCTCCAAAAACACCATCTCCTGCTTATAGTCCTCCAAATGCTCCTTCCCCTCATAACCAACCTCCCTATGTTTCAACACCACCAAAGACACCTTCTCCAATTTATAGTCCTCCAAATGTTCCCACTACTACTCCAAAAACACCTCCCCCTGGCAACCAACCTTATGTCCCAACTCCCTCAAACACTCCTTCTCCTATTTCTCAACCTCCCTACACTCCAACCCCTCCAAAAACGCCTTCCCCTGCCCATCAACCACCCTTTGTTCCAATAACCCCATCTCCAACATCTCAACCACCTTACATTCCCACACCTCCAAACACCACTCCTTCACCCACTTCCCAACCTCCTTCCATTGCAGCACCTCCAAACTCTCATTCCCCAACATCTCAACCACCTTACATTAATCCAACACCTCCAAACACTCCTTCCCCAACATCTCAACCACCCTACCCATCATCGCCCTATCCATCCACCATCCCTCCCTCAACCTCACTCTCTCCATCTTACCCACCTTCTGCTTCAACTGCACCACCCACTTACCCACCCTCTTCCTCCCTCACCCCGGCAACATCGCCGCCATTACCGTCTGCGGCGGCAACAACCCCCTCGCCGTCGTCGTCGTCGGGATCATCTCAAACGCCGTCGTCGTCGAACGAAACGACGCCAGCCAGACTAAACGGTGCGTCGTCTATAACGCCGTCGCGGTTTGGAGTGTATTCACTAACCATTCTGGTCGGTGCTGCTCTAAGCACCACTCTTGGTTAG 2295 0.4697 MELEIRVCLLLFLFGILSGSQAYTFYVGGKDGWVLYPSENYNHWAERMRFQVSDTLVFKYKKDSDTVLVVNNDDYEKCNKKNPIKKFEDGDSEFQFDRSGPFYFISGKDDNCEKGQKLIIVVLAVREPPPYYSPTPPNTPYVPITPPKAPYHPNPPYVPTPPNTPYVPITPPRAPYVPAPPQTPTVPTPPETPYHPPYVPIPPPKTPSPISSPPYVHPKPPSPIHYPPNVPTPPKTPSPVYTPPNVPTQAPSPANHPPYIPTPPQTPSPVYTPPNFPTPPKIPSPVYTPPKAPSPSNNPPYVPTPPKTPSPSYNPPNVPTPPKTPSPIYTPPNVPTPPKTPSPAYSPPNAPSPHNQPPYVPTPPKTPSPSYNPPNVPTPPKTPSPIYTPPNVPTPPKTPSPAYSPPNAPSPHNQPPYVPTPPKTPSPIYSPPNVPTPPKTPSPIYTPPNVPTPPKTPSPAYSPPNAPSPHNQPPYVPTPPKTPSPSYNPPNVPTPPKTPSPIYTPPNVPTPPKTPSPAYSPPNAPSPHNQPPYVSTPPKTPSPIYSPPNVPTTTPKTPPPGNQPYVPTPSNTPSPISQPPYTPTPPKTPSPAHQPPFVPITPSPTSQPPYIPTPPNTTPSPTSQPPSIAAPPNSHSPTSQPPYINPTPPNTPSPTSQPPYPSSPYPSTIPPSTSLSPSYPPSASTAPPTYPPSSSLTPATSPPLPSAAATTPSPSSSSGSSQTPSSSNETTPARLNGASSITPSRFGVYSLTILVGAALSTTLG* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2955 764 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Gso11g2955 764 PANTHER EARLY NODULIN-LIKE PROTEIN 2 1 359 - -
Gso11g2955 764 CDD OsENODL1_like 23 123 IPR041846 -
Gso11g2955 764 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Gso11g2955 764 MobiDBLite consensus disorder prediction 162 742 - -
Gso11g2955 764 PRINTS Proline rich extensin signature 128 140 - -
Gso11g2955 764 PRINTS Proline rich extensin signature 147 163 - -
Gso11g2955 764 PRINTS Proline rich extensin signature 178 190 - -
Gso11g2955 764 PRINTS Proline rich extensin signature 193 214 - -
Gso11g2955 764 MobiDBLite consensus disorder prediction 162 709 - -
Gso11g2955 764 MobiDBLite consensus disorder prediction 710 742 - -
Gso11g2955 764 Gene3D - 21 126 IPR008972 -
Gso11g2955 764 PANTHER BLUE COPPER PROTEIN 1 359 IPR039391 GO:0009055
Gso11g2955 764 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2955 Gso-Chr11 45343680 45346476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2955 10 140 Phytocyanin Superfamily AT5G53870 55.000 3.63e-49 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2955 - - gmx:100809181 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1906 12 42931629 42933720 Gso11g2955 11 45343680 45346476 GST