Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g2951 | ATGGTGCTGTTCAGATGTTTCTCAGTGACACTTTTGCAGTCGTGTTTCTTGGCTTGCTTGCTTTGCTTGTCACTAGGGCTTAATAATAATAATAATAATCAAGCCCTATCCTGTGACCCTCATGATTTATCAGCTCTTAAGGAGTTTGCAGGCAACCTTACAAGTGGCTCTATCATCACAGCATGGCCCAATGACACTTTCTGCTGCAACTGGCTTGGAGTTGTTTGTGCTAATGTGACTGGTGATGCTGGTGGAACAGTTGCTAGTAGAGTGACCAAGTTGATCCTACCAAAAATGAGTCTCAATGGTACAATTTCACCCTCTTTGGCACAGCTAGATCAACTCAATGTGCTGAATCTTTCATTCAATCACCTTAAGGGTGCTTTGCCTGTGGAGTTCTCCAAGTTGAAGCAGTTGAAGTTCCTTGATGTGAGCCATAACATGCTGTCTGGACCTGTTGCTGGAGCTCTTTCTGGTTTGCAATCCATTGAAGTGTTGAATATTTCTAGCAATTTACTTACTGGAGCTCTCTTCCCTTTTGGGGAATTCCCTCATCTCCTTGCTCTCAATGTGAGTAACAATTCATTCACTGGCGGATTCAGTTCACAAATTTGCAGTGCCTCCAAGGATCTTCACACCCTTGATTTGTCTGTAAATCATTTTGATGGCGGTCTTGAAGGCTTGGACAACTGCACCTCTCTCCAACGGTTGCATTTGGATTCCAATGCATTCACTGGTCATCTTCCAGATTCCTTGTATTCAATGTCAGCCTTGGAGGAACTCACAGTTTGTGCCAACAATTTATCTGGCCAGTTAAGCGAGCAACTAAGTAAGCTCTCTAACCTAAAAACTTTGGTGGTTTCTGGGAACAGGTTTTCTGGGGAATTCCCAAATGTGTTTGGGAACCTTTTGCAGCTAGAAGAATTAGAAGCACATGCCAATTCATTTTTTGGACCCTTGCCTTCCACCTTGGCTTTATGCTCTAAGCTTAGGGTGCTTAATCTTAGAAATAATTCCCTGTCAGGGCAAATTGGTCTTAATTTCACTGGCTTGTCTAATCTTCAAACACTTGACCTTGCTACTAATCATTTCTTTGGACCCCTTCCAACTTCCCTGTCCAATTGCCGCAAATTGAAAGTTTTAAGCCTTGCTAGGAATGGTTTAAATGGTTCTGTCCCTGAAAGCTATGCCAACCTCACTTCACTTTTGTTTGTATCTTTCTCAAACAACAGCATTCAGAACTTATCTGTGGCAGTGTCTGTTCTGCAGCAGTGCAAAAATCTCACCACCCTTGTACTTACTAAGAATTTCCGTGGTGAGGTAATTTCAGAAAGTGTGACAGTAGAATTTGAGAGCCTTATGATTTTAGCACTTGGGAATTGTGGTCTTAAAGGCCATATTCCTTCTTGGTTATCCAATTGCAGGAAGTTGGCAGTTCTTGACTTGTCTTGGAACCATTTGAATGGTAGTGTTCCTTCTTGGATTGGTCAGATGGACAGCTTGTTCTATTTGGATTTCTCAAATAATTCTCTCACAGGAGAAATACCAAAAGGTCTGGCAGAGTTGAAGGGCCTCATGTGCGCTAACTGTAATAGAGAAAACCTTGCTGCTTTTGCATTCATTCCTCTCTTTGTTAAGAGAAACACAAGTGTAAGTGGACTGCAATATAACCAGGCATCAAGTTTCCCTCCTTCAATTCTCTTGAGCAATAACATATTGAGTGGGAATATATGGCCTGAAATTGGTCAATTGAAAGCACTGCATGTCTTGGATTTAAGCAGAAACAACATCGCTGGTACCATTCCTAGCACAATTTCAGAGATGGAGAACTTGGAATCATTAGATTTGTCTTATAATGATCTTTCAGGAGAAATTCCTCCATCATTTAACAACCTCACATTCTTGTCAAAGTTCAGTGTGGCACATAATCGCTTAGAGGGACCAATTCCAACTGGAGGGCAGTTTTTAAGCTTCCCTAGTTCAAGTTTTGAGGGCAACCTGGGGCTTTGTAGGGAAATTGATTCTCCTTGCAAAATAGTCAACAATACAAGTCCCAACAATTCTTCTGGTTCTTCCAAAAAACGTGGTAGAAGCAATGTCCTTGGCATAACAATCAGTATAGGGATAGGGCTTGCACTGCTTCTTGCAATTATTCTGCTAAAAATGTCAAAGAGGGATGATGATAAGCCTATGGATAACTTTGATGAGGAACTCAATGGTAGGCCACGCAGGTTATCCGAAGCACTTGCTTCCTCAAAGTTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTTACAGTTGCAGATTTGTTAAAATCCACAAACAATTTCAACCAGGCAAATATTATTGGTTGTGGTGGGTTTGGTCTTGTCTACAAGGCATATCTTCCAAATGGTGCAAAAGCAGCTGTCAAGAGACTTTCTGGGGACTGTGGTCAGATGGAACGTGAATTCCAAGCTGAAGTAGAGGCCCTCTCAAGAGCTCAACACAAGAACCTTGTTTCTCTGAAAGGTTATTGTCGGCACGGCAATGACAGATTGCTAATATACTCATACTTGGAGAATGGAAGCTTGGATTATTGGCTGCATGAGTGTGTGGATGAAAATTCAGCTCTCAAATGGGATTCAAGACTCAAGGTTGCACAAGGCGCTGCTCGCGGATTAGCTTACTTGCATAAGGGGTGTGAACCATTCATAGTGCATCGAGATGTTAAATCTAGCAACATACTTTTGGATGACAACTTTGAAGCTCATTTGGCTGATTTTGGTCTCTCAAGGCTACTTCAACCGTATGACACTCATGTCACAACTGATTTGGTAGGAACTTTAGGATACATTCCTCCTGAATATAGTCAGACACTGACGGCAACCTTCAGGGGTGATGTCTATAGTTTCGGTGTTGTTCTTCTCGAGCTTCTTACTGGTAGAAGGCCTGTGGAAGTCATCAAGGGGAAAAACTGCAGAAATCTGGTGTCTTGGGTGTATCAGATGAAATCTGAGAATAAGGAGCAGGAAATTTTTGATCCAGTAATTTGGCACAAGGATCATGAGAAACAGCTATTGGAGGTGCTTGCCATTGCGTGTAAATGCCTAAACCAAGATCCTAGGCAGAGACCCTCTATTGAAATAGTTGTTTCATGGCTTGATAGTGTAAGATTTGATGGTTCTCAACAGTGA | 3177 | 0.4193 | MVLFRCFSVTLLQSCFLACLLCLSLGLNNNNNNQALSCDPHDLSALKEFAGNLTSGSIITAWPNDTFCCNWLGVVCANVTGDAGGTVASRVTKLILPKMSLNGTISPSLAQLDQLNVLNLSFNHLKGALPVEFSKLKQLKFLDVSHNMLSGPVAGALSGLQSIEVLNISSNLLTGALFPFGEFPHLLALNVSNNSFTGGFSSQICSASKDLHTLDLSVNHFDGGLEGLDNCTSLQRLHLDSNAFTGHLPDSLYSMSALEELTVCANNLSGQLSEQLSKLSNLKTLVVSGNRFSGEFPNVFGNLLQLEELEAHANSFFGPLPSTLALCSKLRVLNLRNNSLSGQIGLNFTGLSNLQTLDLATNHFFGPLPTSLSNCRKLKVLSLARNGLNGSVPESYANLTSLLFVSFSNNSIQNLSVAVSVLQQCKNLTTLVLTKNFRGEVISESVTVEFESLMILALGNCGLKGHIPSWLSNCRKLAVLDLSWNHLNGSVPSWIGQMDSLFYLDFSNNSLTGEIPKGLAELKGLMCANCNRENLAAFAFIPLFVKRNTSVSGLQYNQASSFPPSILLSNNILSGNIWPEIGQLKALHVLDLSRNNIAGTIPSTISEMENLESLDLSYNDLSGEIPPSFNNLTFLSKFSVAHNRLEGPIPTGGQFLSFPSSSFEGNLGLCREIDSPCKIVNNTSPNNSSGSSKKRGRSNVLGITISIGIGLALLLAIILLKMSKRDDDKPMDNFDEELNGRPRRLSEALASSKLVLFQNSDCKDLTVADLLKSTNNFNQANIIGCGGFGLVYKAYLPNGAKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYLENGSLDYWLHECVDENSALKWDSRLKVAQGAARGLAYLHKGCEPFIVHRDVKSSNILLDDNFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVYQMKSENKEQEIFDPVIWHKDHEKQLLEVLAIACKCLNQDPRQRPSIEIVVSWLDSVRFDGSQQ* | 1059 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g2951 | 1058 | Gene3D | Ribonuclease Inhibitor | 260 | 370 | IPR032675 | - | |
Gso11g2951 | 1058 | Gene3D | Ribonuclease Inhibitor | 41 | 155 | IPR032675 | - | |
Gso11g2951 | 1058 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 566 | 625 | - | - | |
Gso11g2951 | 1058 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 621 | 1051 | - | - | |
Gso11g2951 | 1058 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 35 | 170 | - | - | |
Gso11g2951 | 1058 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 285 | 444 | - | - | |
Gso11g2951 | 1058 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 455 | 522 | - | - | |
Gso11g2951 | 1058 | PANTHER | PHYTOSULFOKINE RECEPTOR 2 | 180 | 288 | - | - | |
Gso11g2951 | 1058 | ProSitePatterns | Protein kinases ATP-binding region signature. | 783 | 805 | IPR017441 | GO:0005524 | |
Gso11g2951 | 1058 | Gene3D | Ribonuclease Inhibitor | 156 | 258 | IPR032675 | - | |
Gso11g2951 | 1058 | SUPERFAMILY | Protein kinase-like (PK-like) | 760 | 1048 | IPR011009 | - | |
Gso11g2951 | 1058 | SMART | LRR_typ_2 | 584 | 607 | IPR003591 | - | |
Gso11g2951 | 1058 | SMART | LRR_typ_2 | 136 | 159 | IPR003591 | - | |
Gso11g2951 | 1058 | SMART | LRR_typ_2 | 112 | 135 | IPR003591 | - | |
Gso11g2951 | 1058 | SMART | LRR_typ_2 | 231 | 255 | IPR003591 | - | |
Gso11g2951 | 1058 | SMART | LRR_typ_2 | 399 | 422 | IPR003591 | - | |
Gso11g2951 | 1058 | SMART | LRR_typ_2 | 279 | 302 | IPR003591 | - | |
Gso11g2951 | 1058 | SMART | LRR_typ_2 | 498 | 522 | IPR003591 | - | |
Gso11g2951 | 1058 | SMART | LRR_typ_2 | 608 | 631 | IPR003591 | - | |
Gso11g2951 | 1058 | SMART | LRR_typ_2 | 351 | 375 | IPR003591 | - | |
Gso11g2951 | 1058 | Pfam | Leucine rich repeat N-terminal domain | 40 | 76 | IPR013210 | - | |
Gso11g2951 | 1058 | SUPERFAMILY | L domain-like | 553 | 685 | - | - | |
Gso11g2951 | 1058 | SUPERFAMILY | RNI-like | 228 | 531 | - | - | |
Gso11g2951 | 1058 | Pfam | Leucine rich repeat | 586 | 645 | IPR001611 | GO:0005515 | |
Gso11g2951 | 1058 | Pfam | Leucine rich repeat | 452 | 511 | IPR001611 | GO:0005515 | |
Gso11g2951 | 1058 | Pfam | Leucine rich repeat | 90 | 149 | IPR001611 | GO:0005515 | |
Gso11g2951 | 1058 | SMART | serkin_6 | 777 | 1048 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g2951 | 1058 | CDD | STKc_IRAK | 783 | 1049 | - | - | |
Gso11g2951 | 1058 | ProSiteProfiles | Protein kinase domain profile. | 777 | 1053 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g2951 | 1058 | Gene3D | Phosphorylase Kinase; domain 1 | 741 | 852 | - | - | |
Gso11g2951 | 1058 | Pfam | Protein kinase domain | 778 | 1045 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g2951 | 1058 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 621 | 1051 | - | - | |
Gso11g2951 | 1058 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 35 | 170 | - | - | |
Gso11g2951 | 1058 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 566 | 625 | - | - | |
Gso11g2951 | 1058 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 455 | 522 | - | - | |
Gso11g2951 | 1058 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 285 | 444 | - | - | |
Gso11g2951 | 1058 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 180 | 288 | - | - | |
Gso11g2951 | 1058 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 899 | 911 | IPR008271 | GO:0004672|GO:0006468 | |
Gso11g2951 | 1058 | ProSiteProfiles | Leucine-rich repeat profile. | 610 | 632 | IPR001611 | GO:0005515 | |
Gso11g2951 | 1058 | Gene3D | Ribonuclease Inhibitor | 377 | 681 | IPR032675 | - | |
Gso11g2951 | 1058 | Gene3D | Transferase(Phosphotransferase) domain 1 | 853 | 1054 | - | - | |
Gso11g2951 | 1058 | SUPERFAMILY | L domain-like | 91 | 297 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g2951 | Gso-Chr11 | 45286997 | 45291428 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g2951 | 48 | 411 | Receptor kinase-like Gene Family | AT1G55610 | 26.185 | 3.17e-22 | 101 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Gso11g2951 | Pkinase | 1.6e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g2951 | - | - | gmx:100807582 | 2015.74 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g1908 | 12 | 42958632 | 42962970 | Gso11g2951 | 11 | 45286997 | 45291428 | GST |