Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g2937 | ATGCGATCATCGCCGTCTTCATTGGGTTCGTCGTCTCGATCAGGTTCGCGGCTTCGGAAGAAGCACAAGAGGTTGGATGCAATATGTGAGGAAGAGTACAGTCGAAACCATGGTGAGTTGAATGAGGATAATGAGGATAATGGGGATTTGAACCCTGATGCTGGGGTTCGTCGAAGCTCCCGGGTTCGCCGTGCCCCAATGCTGCTCGACGCTTCTCCAGCTCCGCCGAAGAAAAGGAGGAAAGTGGGGAAGGGTGGAATTGGTCGTATTGTGGAGGGTGCTAGGAGATTAGGGCGGGAAAATAAAGGTTCTGGTGGGGCTTGGAGTTCTAGGTTGAGATCAAGAGTTGGCAATGTAGGTGTTAGGGTGAAGGAGGAGAGGGAATCGCCTCGTGGGAAGAGGAAGCTTTTTGAGGGTGTGGTTGGAAGGAGGGGTGTTGAGGAGGTTGGTGGGAAAGAGGAGTTGGGAGGTTTGATGCCGAAAGTGGTTAAGTCGAAGAGACCGGGGAGGATTAAAGCCACAAAGCATGAGGAAGGGCATGAAGAGGATGTGTCTGATGGGAGTTTGGAGGAGAGTAAGAGTCAGGAAGTGGAGATTATGTTGAGCAGTGGTGAGGAGAGTGATTCTGATCCGGAAACCAAATTGTCTGGAGGGGATTGCATGGATGATTCAGATGGAAATGCCTCTCCTGTGATAGGGAATGAGGAGGGGAATCCAATGGATGATTCGGATGGAGATGTCGCTCCTATGATAGGGAATGAGGAGGGGGATCAGATGGATGATTTTGATGGAAATGACCCTCTGATGGTAGGGAACAAGAAGAACTTATGCAACGATTTGCAAATAGATGAATGTGATGGCAACGCTGAATCGTCTCCAATGGAGCATGTAGTTAAAGTGGATGATCAGTTAGAGAGTGTGAAGGAAAGCAAAAATGTAGGTGATGTAGCTGAACAGGTAGATAATGAAGGATCTGTTGGTAAGGAGGTTGACGTCAATGAAAATGTCTTGAAAGATGCAAATGATGGTAAGGAGGATGATGCTGATGAAAATGTCTTGAAAGGTGCAAATGTTGGGAGGTCGGATGAGTTGAAACATGCTTCAATTGACAAGCGTGGTCACCAGCGTATCAAAGAGGGAAGGCGGTGTGGTTTGTGTGGTGGAGGGAGCGATGGTAAGCCTCCGAAAAGGTTAGCTCAGGATAATGGTGAAAGTGAGAATGAAGCTTATAGCGGGTCATCATCTTCAGAGGAGACTAATTATGATATCTGGGATGGTTTTGATGATGAACCTGGTTGGCTTGGGCGTCTCTTGGGTCCTATTAATGATCACTGTGGTATTGCTAGAATATGGGTTCATCTGCACTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTAACTTTGGATGCTTAAAAAATGCGAGAGCTGCACTTTTCCGAGGAAGAGCATTGAAGTGCACGCGTTGTGGGAGGCGAGGGGCAACCACTGGTTGTCGCGTTGATCGTTGTCCAAGAACTTATCACTTGCCTTGTGCAAGAGCAAGTGGTTGCATCTTTGATCATCGCAAATTTCTTATAGCTTGCACAGATCATCGGCATCTCTTCCAACCACGTGGCAATAAATATTTAGCCCGGATAAAGAAGTTGAAGGCTAGGAAAATAATGTGGGAGATAAGGAAGCGATCAAATGAAGCTTGCAGAAAAGATATTGGAGATGAAGAGAGATGGTTGGAAAATTGTGGAGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCAGTGTACATTGGGGGTTCAGATTCTGCCAGTGAAAATTCATTTCAGGGATGGGAATCTGTTGCTGGGCTTAAAGATGTCATCCGTTGTATGAAAGAAGTTGTTATTTTACCTCTCCTATATCCTGACCTCTTTGATAATTTAGGGCTTACACCTCCAAGAGGTGTTCTTTTGCATGGGCATCCTGGAACGGGGAAAACTTTGGTGGTCCGGGCATTGATAGGTGCATGTTCCCGTGGTGATAAGCGGATTGCATATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAGTATGTTGGTGATGCTGAGCGTCAACTAAGACTATTATTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAAATAGATGGGTTGGCACCCCGCCGCACTAGGCAGCAAGATCAGACACACAGTTCTGTTGTGTCAACATTGCTTGCTCTTATGGATGGTTTGAAATCAAGGGGTTCAGTTGTGGTAATAGGTGCAACAAACCGTCCTGAAGCTGTTGACCCAGCACTTAGGCGCCCCGGTAGATTTGATCGAGAAATTTATTTTCCATTACCAACAATTGAGGACAGAGCTTCCATTCTCTCACTTCACACCCAGAAGTGGCCAAAACCAATTACCGGGTCCTTGCTTGAGTGGATTGCAAGAAAAACACCTGGATTTGCTGGTGCTGATCTCCAGGCTCTTTGTACCCAAGCGGCGATGAATGCGTTGAAGAGGAATTTCCCTTTGCAAGAAGTCCTGTCTTTAGCTGCTGAAGAAAAACATTCTGGTTCTAAGCACATTCCTCTTCCATCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCTTTTTTTTCTTCCCCACTACCTTGCTCCCGGAGAGATGCTGGAAATGCTGCTAATGATGCAGTATGCTCCCCTCTTCCCATCCAACTTATTCCTTGTTTATTGCAGCCATTATGCACTCTTCTTGTATCTCTTTATCTTGATGAACGATTATGGTTACCACTTTCCATACTGAAAGCTGCAACAGTGATAAAGGATGTCATGATTTCAGCTCTAGACAAAAAGCAAAAGCCTTCTGATCGCTGGTGGTTGCACATGGATGATTTTCTTCAAGAAACAAACATTGTTTATGAGTTAAAGAGAAAGCTTACTTGTTCTGGCATTTTATCTGCCAACGACGGCAATGCTGGTTCTTGTGAAACTGAGGATGATGCCAATAATAACAGCTTGAAGTTAGAATCCTCCACAAGGAACCATCCTGGCATGCGTAGTGGTTTATTTGCATTGACCAACAAATCAGGATTTCGGATATTAATATCTGGAAATTCACGATCTGGCCCGAGGCATCTTGCTTCTTGCCTTCTTCACTGCTTTATTGGTAATATTGAAATACAGAAGATTGATATGGCAACTATTTTACAAGAAGGGCATGGAGAAGTGGTGCAAGGGATTGGTCAGATACTAATGAAATGTGCTAGCAGGCAATCTTGCATAGTATTCTTGCCAAGAATTGATTTATGGGCTGTGGAAAAACATTTCCAAATTGCTGAAAGGACTGATTCGTGTTTAATGATGGGCAAGTCGTGTTTCACACGAAACCAAGTTGTTGAGAAGGAAAATGAGATTAGTACTGAGAAAAACTCAACTGAGATGATCAAAGGCCAAGCCAACACAAAGGCTTCCTATGCCTGGATGTCATTTATTGAGCAGGTGGAATCCATTGATGTATCCACATCCTTGATGATTCTGGCTACTTCAGAAGTTCCCTATACAGAACTTCCGCACAAAGTAAGGGAATTCTTTAAGAGTTATCAATCTAAAGATGGCCGGTCAACTCCTTTGGAGCAGACAATTCCTCGATTCTCTGTGCAGATTGATGAGAATTTTGATCATGACATGGTGATCAATCTATCCGCACTAGAGCTATTGAGAAATGTAGTTGAGCAGCTGGTTCAATTGATTCATCAGAGATCTCATGTTCATATGGGTTCCCAAAAGGGCAGAAGTTATGAATCAATTGAAGTTTCTAAAGATAAGGTATGTCAAAGAAAAGAAGATGGACCAGCTAATGATAAGAAGAGTGAAATCCAACTTGAATCCTTTACAAAAGTTCCACCAACACCCAACAGCAAGTCACTGAAGGGAAAGTCGACCCTGTTGTTAGCAATATCCACATTTGGCTATCAAATTCTTTTATACCCACATTTTGCTGAACTTTGTTGGGTCACTTCAAAACTCGATGAAGGTCCTTGTGCTGATGTAAGTGGACCTTGGAGGGGCTGGCCTTTCAATTCTTGTATAGTTCGTCCTAATAATTCACAAGACAAGGTGGCAGTATCTTGTAGTTCTGGTGGCACCAAAAGTAGGGAAGCATCTGGTCTAGTCAGAGGCTTGATTGCTGTTGGTTTATCAGCTTACAGAGGTGTTTATAAATCAGTTAGGGAAGTTTCCCTTGATGTAAGGAAGGTTCTCGAGATCTTAATTGAGAAAATCAATACCAAAATTCAAGTGGGGAAAGATAGATATCAATATTTTCGTATTTTGTCACAAGTGGCTTATTTAGAAGACATGGTCAACAACTGGGCTTATTCATTGCTAAGTCTGGAGCAGGATTCCCCTGAGCATAAAACAAAGGTTATACCAGAAAGTGGTGGGCCATTAAACAGTCATCTCACGCGGGAAAATCACCAAACTGAAGATGAGGACTGTCATTTAGTTGTTCCTGTGGATGGTAATGATTTGGAGACATTGGAGGGAAGTCACAAGGAAATTCCTTCTGAAACAACTGGATATCTTGCCTCTGATGACAACAATGATAATGTAGAGATTATTGATTGTGATGATGGAAATGCTAGTTCTGAAGGATCTCTACAGAACCATTCCTTTCCAGATAATAAGAATATCAACAACACTACTGCTGCAAGCCAACCACTTTATCCATCCACAAGTCTGGAGAATGGGACATTATTTGGACAATCTGAACCTGTAACTGCTGGAAATAATGAAGAGATGGATGGAGAACTAGAGATTTCAGAAGACTTGAAGAAATCCACGTGCACTCACCCTGTGGTCCCTTTTCAAAATGGACTTCACACTGCTTGTGATCCAGAGACACAGAATGTCGAGATTGGTAACTTAATTACCATCTCTGATCAGCCTTTTAGCTTGTCCGCGGTAGAGACTGCTACTAAATCAAGTGATGGTAAATCTGATAAACAGGAGAATGCTACAGATAACAATGTCTCTTCAAGTAATGGCAGTGGCCCTGCTGAATCTGGGGTTATTTGCTTGTATCAATGTTGCCCTGCATGCCTCCACAGTCTCCATCACTTGACAAAGAAAATACTTGTTGAAAAATGGGGTTTAAACAGTGAGCAGTGGACGGCAGAAGATGTCCATGATGCTGTTGCATCATTATCTGTGGATCTTATTTCAGCAGTTAGAAAATGCTCTATGCCTCAAGATTTCATTGATTCATCAAATAAAATCTCAAGAAATGAAAAGCATGGAACATCTCTCGACTGTTTGAAGCTGAGAACGTGTAATAATGGAAACCAAGGCAAGGATGTTGTGCCAGCTGAATGTTTTTCTCACGCAGCAAGCCAACATGCAACTGCAATGGAAGATATGGCACTGAATGAAGAATCGACGAAGCTTGATCTTAAATTTGTTTTCAGAGATGGTGTACTAGTTCATATGGACCCAGATAAGGATGTCAAAGTTCACTGTAAATTTGAGAATTTGTGCCTTTGTTCTTTAAGAGAGTTGATAGTAATGAAAAAGCGCCCTTTTGATTAG | 5610 | 0.4305 | MRSSPSSLGSSSRSGSRLRKKHKRLDAICEEEYSRNHGELNEDNEDNGDLNPDAGVRRSSRVRRAPMLLDASPAPPKKRRKVGKGGIGRIVEGARRLGRENKGSGGAWSSRLRSRVGNVGVRVKEERESPRGKRKLFEGVVGRRGVEEVGGKEELGGLMPKVVKSKRPGRIKATKHEEGHEEDVSDGSLEESKSQEVEIMLSSGEESDSDPETKLSGGDCMDDSDGNASPVIGNEEGNPMDDSDGDVAPMIGNEEGDQMDDFDGNDPLMVGNKKNLCNDLQIDECDGNAESSPMEHVVKVDDQLESVKESKNVGDVAEQVDNEGSVGKEVDVNENVLKDANDGKEDDADENVLKGANVGRSDELKHASIDKRGHQRIKEGRRCGLCGGGSDGKPPKRLAQDNGESENEAYSGSSSSEETNYDIWDGFDDEPGWLGRLLGPINDHCGIARIWVHLHCAVWSPEVYFANFGCLKNARAALFRGRALKCTRCGRRGATTGCRVDRCPRTYHLPCARASGCIFDHRKFLIACTDHRHLFQPRGNKYLARIKKLKARKIMWEIRKRSNEACRKDIGDEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSASENSFQGWESVAGLKDVIRCMKEVVILPLLYPDLFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGACSRGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPRRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPTIEDRASILSLHTQKWPKPITGSLLEWIARKTPGFAGADLQALCTQAAMNALKRNFPLQEVLSLAAEEKHSGSKHIPLPSFAVEERDWLEAFFSSPLPCSRRDAGNAANDAVCSPLPIQLIPCLLQPLCTLLVSLYLDERLWLPLSILKAATVIKDVMISALDKKQKPSDRWWLHMDDFLQETNIVYELKRKLTCSGILSANDGNAGSCETEDDANNNSLKLESSTRNHPGMRSGLFALTNKSGFRILISGNSRSGPRHLASCLLHCFIGNIEIQKIDMATILQEGHGEVVQGIGQILMKCASRQSCIVFLPRIDLWAVEKHFQIAERTDSCLMMGKSCFTRNQVVEKENEISTEKNSTEMIKGQANTKASYAWMSFIEQVESIDVSTSLMILATSEVPYTELPHKVREFFKSYQSKDGRSTPLEQTIPRFSVQIDENFDHDMVINLSALELLRNVVEQLVQLIHQRSHVHMGSQKGRSYESIEVSKDKVCQRKEDGPANDKKSEIQLESFTKVPPTPNSKSLKGKSTLLLAISTFGYQILLYPHFAELCWVTSKLDEGPCADVSGPWRGWPFNSCIVRPNNSQDKVAVSCSSGGTKSREASGLVRGLIAVGLSAYRGVYKSVREVSLDVRKVLEILIEKINTKIQVGKDRYQYFRILSQVAYLEDMVNNWAYSLLSLEQDSPEHKTKVIPESGGPLNSHLTRENHQTEDEDCHLVVPVDGNDLETLEGSHKEIPSETTGYLASDDNNDNVEIIDCDDGNASSEGSLQNHSFPDNKNINNTTAASQPLYPSTSLENGTLFGQSEPVTAGNNEEMDGELEISEDLKKSTCTHPVVPFQNGLHTACDPETQNVEIGNLITISDQPFSLSAVETATKSSDGKSDKQENATDNNVSSSNGSGPAESGVICLYQCCPACLHSLHHLTKKILVEKWGLNSEQWTAEDVHDAVASLSVDLISAVRKCSMPQDFIDSSNKISRNEKHGTSLDCLKLRTCNNGNQGKDVVPAECFSHAASQHATAMEDMALNEESTKLDLKFVFRDGVLVHMDPDKDVKVHCKFENLCLCSLRELIVMKKRPFD* | 1870 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 1 | 111 | - | - | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 1525 | 1544 | - | - | |
Gso11g2937 | 1869 | Gene3D | - | 619 | 793 | IPR027417 | - | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 1555 | 1603 | - | - | |
Gso11g2937 | 1869 | Gene3D | - | 794 | 859 | - | - | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 1480 | 1504 | - | - | |
Gso11g2937 | 1869 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 427 | 534 | IPR013083 | - | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 383 | 418 | - | - | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 159 | 267 | - | - | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 171 | 193 | - | - | |
Gso11g2937 | 1869 | ProSitePatterns | AAA-protein family signature. | 763 | 781 | IPR003960 | GO:0005524|GO:0016887 | |
Gso11g2937 | 1869 | CDD | AAA | 652 | 793 | - | - | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 308 | 329 | - | - | |
Gso11g2937 | 1869 | Pfam | PHD-like zinc-binding domain | 453 | 532 | - | - | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 1662 | 1691 | - | - | |
Gso11g2937 | 1869 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 420 | 532 | IPR034732 | - | |
Gso11g2937 | 1869 | Pfam | ATPase family associated with various cellular activities (AAA) | 658 | 793 | IPR003959 | GO:0005524|GO:0016887 | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 1550 | 1609 | - | - | |
Gso11g2937 | 1869 | PANTHER | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN | 53 | 1865 | - | - | |
Gso11g2937 | 1869 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 620 | 851 | IPR027417 | - | |
Gso11g2937 | 1869 | SMART | AAA_5 | 654 | 795 | IPR003593 | - | |
Gso11g2937 | 1869 | PANTHER | AAA DOMAIN-CONTAINING | 53 | 1865 | IPR045199 | - | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 23 | 64 | - | - | |
Gso11g2937 | 1869 | Pfam | AAA+ lid domain | 819 | 851 | IPR041569 | - | |
Gso11g2937 | 1869 | MobiDBLite | consensus disorder prediction | 404 | 418 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g2937 | Gso-Chr11 | 45127755 | 45135689 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g2937 | 620 | 855 | Calmodulin-binding Proteins | AT3G56690 | 40.756 | 1.49e-44 | 175 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g2937 | - | - | gmx:100803849 | 3620.86 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g1919 | 12 | 43102389 | 43110808 | Gso11g2937 | 11 | 45127755 | 45135689 | GST |