Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2937 ATGCGATCATCGCCGTCTTCATTGGGTTCGTCGTCTCGATCAGGTTCGCGGCTTCGGAAGAAGCACAAGAGGTTGGATGCAATATGTGAGGAAGAGTACAGTCGAAACCATGGTGAGTTGAATGAGGATAATGAGGATAATGGGGATTTGAACCCTGATGCTGGGGTTCGTCGAAGCTCCCGGGTTCGCCGTGCCCCAATGCTGCTCGACGCTTCTCCAGCTCCGCCGAAGAAAAGGAGGAAAGTGGGGAAGGGTGGAATTGGTCGTATTGTGGAGGGTGCTAGGAGATTAGGGCGGGAAAATAAAGGTTCTGGTGGGGCTTGGAGTTCTAGGTTGAGATCAAGAGTTGGCAATGTAGGTGTTAGGGTGAAGGAGGAGAGGGAATCGCCTCGTGGGAAGAGGAAGCTTTTTGAGGGTGTGGTTGGAAGGAGGGGTGTTGAGGAGGTTGGTGGGAAAGAGGAGTTGGGAGGTTTGATGCCGAAAGTGGTTAAGTCGAAGAGACCGGGGAGGATTAAAGCCACAAAGCATGAGGAAGGGCATGAAGAGGATGTGTCTGATGGGAGTTTGGAGGAGAGTAAGAGTCAGGAAGTGGAGATTATGTTGAGCAGTGGTGAGGAGAGTGATTCTGATCCGGAAACCAAATTGTCTGGAGGGGATTGCATGGATGATTCAGATGGAAATGCCTCTCCTGTGATAGGGAATGAGGAGGGGAATCCAATGGATGATTCGGATGGAGATGTCGCTCCTATGATAGGGAATGAGGAGGGGGATCAGATGGATGATTTTGATGGAAATGACCCTCTGATGGTAGGGAACAAGAAGAACTTATGCAACGATTTGCAAATAGATGAATGTGATGGCAACGCTGAATCGTCTCCAATGGAGCATGTAGTTAAAGTGGATGATCAGTTAGAGAGTGTGAAGGAAAGCAAAAATGTAGGTGATGTAGCTGAACAGGTAGATAATGAAGGATCTGTTGGTAAGGAGGTTGACGTCAATGAAAATGTCTTGAAAGATGCAAATGATGGTAAGGAGGATGATGCTGATGAAAATGTCTTGAAAGGTGCAAATGTTGGGAGGTCGGATGAGTTGAAACATGCTTCAATTGACAAGCGTGGTCACCAGCGTATCAAAGAGGGAAGGCGGTGTGGTTTGTGTGGTGGAGGGAGCGATGGTAAGCCTCCGAAAAGGTTAGCTCAGGATAATGGTGAAAGTGAGAATGAAGCTTATAGCGGGTCATCATCTTCAGAGGAGACTAATTATGATATCTGGGATGGTTTTGATGATGAACCTGGTTGGCTTGGGCGTCTCTTGGGTCCTATTAATGATCACTGTGGTATTGCTAGAATATGGGTTCATCTGCACTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTAACTTTGGATGCTTAAAAAATGCGAGAGCTGCACTTTTCCGAGGAAGAGCATTGAAGTGCACGCGTTGTGGGAGGCGAGGGGCAACCACTGGTTGTCGCGTTGATCGTTGTCCAAGAACTTATCACTTGCCTTGTGCAAGAGCAAGTGGTTGCATCTTTGATCATCGCAAATTTCTTATAGCTTGCACAGATCATCGGCATCTCTTCCAACCACGTGGCAATAAATATTTAGCCCGGATAAAGAAGTTGAAGGCTAGGAAAATAATGTGGGAGATAAGGAAGCGATCAAATGAAGCTTGCAGAAAAGATATTGGAGATGAAGAGAGATGGTTGGAAAATTGTGGAGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCAGTGTACATTGGGGGTTCAGATTCTGCCAGTGAAAATTCATTTCAGGGATGGGAATCTGTTGCTGGGCTTAAAGATGTCATCCGTTGTATGAAAGAAGTTGTTATTTTACCTCTCCTATATCCTGACCTCTTTGATAATTTAGGGCTTACACCTCCAAGAGGTGTTCTTTTGCATGGGCATCCTGGAACGGGGAAAACTTTGGTGGTCCGGGCATTGATAGGTGCATGTTCCCGTGGTGATAAGCGGATTGCATATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAGTATGTTGGTGATGCTGAGCGTCAACTAAGACTATTATTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAAATAGATGGGTTGGCACCCCGCCGCACTAGGCAGCAAGATCAGACACACAGTTCTGTTGTGTCAACATTGCTTGCTCTTATGGATGGTTTGAAATCAAGGGGTTCAGTTGTGGTAATAGGTGCAACAAACCGTCCTGAAGCTGTTGACCCAGCACTTAGGCGCCCCGGTAGATTTGATCGAGAAATTTATTTTCCATTACCAACAATTGAGGACAGAGCTTCCATTCTCTCACTTCACACCCAGAAGTGGCCAAAACCAATTACCGGGTCCTTGCTTGAGTGGATTGCAAGAAAAACACCTGGATTTGCTGGTGCTGATCTCCAGGCTCTTTGTACCCAAGCGGCGATGAATGCGTTGAAGAGGAATTTCCCTTTGCAAGAAGTCCTGTCTTTAGCTGCTGAAGAAAAACATTCTGGTTCTAAGCACATTCCTCTTCCATCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCTTTTTTTTCTTCCCCACTACCTTGCTCCCGGAGAGATGCTGGAAATGCTGCTAATGATGCAGTATGCTCCCCTCTTCCCATCCAACTTATTCCTTGTTTATTGCAGCCATTATGCACTCTTCTTGTATCTCTTTATCTTGATGAACGATTATGGTTACCACTTTCCATACTGAAAGCTGCAACAGTGATAAAGGATGTCATGATTTCAGCTCTAGACAAAAAGCAAAAGCCTTCTGATCGCTGGTGGTTGCACATGGATGATTTTCTTCAAGAAACAAACATTGTTTATGAGTTAAAGAGAAAGCTTACTTGTTCTGGCATTTTATCTGCCAACGACGGCAATGCTGGTTCTTGTGAAACTGAGGATGATGCCAATAATAACAGCTTGAAGTTAGAATCCTCCACAAGGAACCATCCTGGCATGCGTAGTGGTTTATTTGCATTGACCAACAAATCAGGATTTCGGATATTAATATCTGGAAATTCACGATCTGGCCCGAGGCATCTTGCTTCTTGCCTTCTTCACTGCTTTATTGGTAATATTGAAATACAGAAGATTGATATGGCAACTATTTTACAAGAAGGGCATGGAGAAGTGGTGCAAGGGATTGGTCAGATACTAATGAAATGTGCTAGCAGGCAATCTTGCATAGTATTCTTGCCAAGAATTGATTTATGGGCTGTGGAAAAACATTTCCAAATTGCTGAAAGGACTGATTCGTGTTTAATGATGGGCAAGTCGTGTTTCACACGAAACCAAGTTGTTGAGAAGGAAAATGAGATTAGTACTGAGAAAAACTCAACTGAGATGATCAAAGGCCAAGCCAACACAAAGGCTTCCTATGCCTGGATGTCATTTATTGAGCAGGTGGAATCCATTGATGTATCCACATCCTTGATGATTCTGGCTACTTCAGAAGTTCCCTATACAGAACTTCCGCACAAAGTAAGGGAATTCTTTAAGAGTTATCAATCTAAAGATGGCCGGTCAACTCCTTTGGAGCAGACAATTCCTCGATTCTCTGTGCAGATTGATGAGAATTTTGATCATGACATGGTGATCAATCTATCCGCACTAGAGCTATTGAGAAATGTAGTTGAGCAGCTGGTTCAATTGATTCATCAGAGATCTCATGTTCATATGGGTTCCCAAAAGGGCAGAAGTTATGAATCAATTGAAGTTTCTAAAGATAAGGTATGTCAAAGAAAAGAAGATGGACCAGCTAATGATAAGAAGAGTGAAATCCAACTTGAATCCTTTACAAAAGTTCCACCAACACCCAACAGCAAGTCACTGAAGGGAAAGTCGACCCTGTTGTTAGCAATATCCACATTTGGCTATCAAATTCTTTTATACCCACATTTTGCTGAACTTTGTTGGGTCACTTCAAAACTCGATGAAGGTCCTTGTGCTGATGTAAGTGGACCTTGGAGGGGCTGGCCTTTCAATTCTTGTATAGTTCGTCCTAATAATTCACAAGACAAGGTGGCAGTATCTTGTAGTTCTGGTGGCACCAAAAGTAGGGAAGCATCTGGTCTAGTCAGAGGCTTGATTGCTGTTGGTTTATCAGCTTACAGAGGTGTTTATAAATCAGTTAGGGAAGTTTCCCTTGATGTAAGGAAGGTTCTCGAGATCTTAATTGAGAAAATCAATACCAAAATTCAAGTGGGGAAAGATAGATATCAATATTTTCGTATTTTGTCACAAGTGGCTTATTTAGAAGACATGGTCAACAACTGGGCTTATTCATTGCTAAGTCTGGAGCAGGATTCCCCTGAGCATAAAACAAAGGTTATACCAGAAAGTGGTGGGCCATTAAACAGTCATCTCACGCGGGAAAATCACCAAACTGAAGATGAGGACTGTCATTTAGTTGTTCCTGTGGATGGTAATGATTTGGAGACATTGGAGGGAAGTCACAAGGAAATTCCTTCTGAAACAACTGGATATCTTGCCTCTGATGACAACAATGATAATGTAGAGATTATTGATTGTGATGATGGAAATGCTAGTTCTGAAGGATCTCTACAGAACCATTCCTTTCCAGATAATAAGAATATCAACAACACTACTGCTGCAAGCCAACCACTTTATCCATCCACAAGTCTGGAGAATGGGACATTATTTGGACAATCTGAACCTGTAACTGCTGGAAATAATGAAGAGATGGATGGAGAACTAGAGATTTCAGAAGACTTGAAGAAATCCACGTGCACTCACCCTGTGGTCCCTTTTCAAAATGGACTTCACACTGCTTGTGATCCAGAGACACAGAATGTCGAGATTGGTAACTTAATTACCATCTCTGATCAGCCTTTTAGCTTGTCCGCGGTAGAGACTGCTACTAAATCAAGTGATGGTAAATCTGATAAACAGGAGAATGCTACAGATAACAATGTCTCTTCAAGTAATGGCAGTGGCCCTGCTGAATCTGGGGTTATTTGCTTGTATCAATGTTGCCCTGCATGCCTCCACAGTCTCCATCACTTGACAAAGAAAATACTTGTTGAAAAATGGGGTTTAAACAGTGAGCAGTGGACGGCAGAAGATGTCCATGATGCTGTTGCATCATTATCTGTGGATCTTATTTCAGCAGTTAGAAAATGCTCTATGCCTCAAGATTTCATTGATTCATCAAATAAAATCTCAAGAAATGAAAAGCATGGAACATCTCTCGACTGTTTGAAGCTGAGAACGTGTAATAATGGAAACCAAGGCAAGGATGTTGTGCCAGCTGAATGTTTTTCTCACGCAGCAAGCCAACATGCAACTGCAATGGAAGATATGGCACTGAATGAAGAATCGACGAAGCTTGATCTTAAATTTGTTTTCAGAGATGGTGTACTAGTTCATATGGACCCAGATAAGGATGTCAAAGTTCACTGTAAATTTGAGAATTTGTGCCTTTGTTCTTTAAGAGAGTTGATAGTAATGAAAAAGCGCCCTTTTGATTAG 5610 0.4305 MRSSPSSLGSSSRSGSRLRKKHKRLDAICEEEYSRNHGELNEDNEDNGDLNPDAGVRRSSRVRRAPMLLDASPAPPKKRRKVGKGGIGRIVEGARRLGRENKGSGGAWSSRLRSRVGNVGVRVKEERESPRGKRKLFEGVVGRRGVEEVGGKEELGGLMPKVVKSKRPGRIKATKHEEGHEEDVSDGSLEESKSQEVEIMLSSGEESDSDPETKLSGGDCMDDSDGNASPVIGNEEGNPMDDSDGDVAPMIGNEEGDQMDDFDGNDPLMVGNKKNLCNDLQIDECDGNAESSPMEHVVKVDDQLESVKESKNVGDVAEQVDNEGSVGKEVDVNENVLKDANDGKEDDADENVLKGANVGRSDELKHASIDKRGHQRIKEGRRCGLCGGGSDGKPPKRLAQDNGESENEAYSGSSSSEETNYDIWDGFDDEPGWLGRLLGPINDHCGIARIWVHLHCAVWSPEVYFANFGCLKNARAALFRGRALKCTRCGRRGATTGCRVDRCPRTYHLPCARASGCIFDHRKFLIACTDHRHLFQPRGNKYLARIKKLKARKIMWEIRKRSNEACRKDIGDEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSASENSFQGWESVAGLKDVIRCMKEVVILPLLYPDLFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGACSRGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPRRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPTIEDRASILSLHTQKWPKPITGSLLEWIARKTPGFAGADLQALCTQAAMNALKRNFPLQEVLSLAAEEKHSGSKHIPLPSFAVEERDWLEAFFSSPLPCSRRDAGNAANDAVCSPLPIQLIPCLLQPLCTLLVSLYLDERLWLPLSILKAATVIKDVMISALDKKQKPSDRWWLHMDDFLQETNIVYELKRKLTCSGILSANDGNAGSCETEDDANNNSLKLESSTRNHPGMRSGLFALTNKSGFRILISGNSRSGPRHLASCLLHCFIGNIEIQKIDMATILQEGHGEVVQGIGQILMKCASRQSCIVFLPRIDLWAVEKHFQIAERTDSCLMMGKSCFTRNQVVEKENEISTEKNSTEMIKGQANTKASYAWMSFIEQVESIDVSTSLMILATSEVPYTELPHKVREFFKSYQSKDGRSTPLEQTIPRFSVQIDENFDHDMVINLSALELLRNVVEQLVQLIHQRSHVHMGSQKGRSYESIEVSKDKVCQRKEDGPANDKKSEIQLESFTKVPPTPNSKSLKGKSTLLLAISTFGYQILLYPHFAELCWVTSKLDEGPCADVSGPWRGWPFNSCIVRPNNSQDKVAVSCSSGGTKSREASGLVRGLIAVGLSAYRGVYKSVREVSLDVRKVLEILIEKINTKIQVGKDRYQYFRILSQVAYLEDMVNNWAYSLLSLEQDSPEHKTKVIPESGGPLNSHLTRENHQTEDEDCHLVVPVDGNDLETLEGSHKEIPSETTGYLASDDNNDNVEIIDCDDGNASSEGSLQNHSFPDNKNINNTTAASQPLYPSTSLENGTLFGQSEPVTAGNNEEMDGELEISEDLKKSTCTHPVVPFQNGLHTACDPETQNVEIGNLITISDQPFSLSAVETATKSSDGKSDKQENATDNNVSSSNGSGPAESGVICLYQCCPACLHSLHHLTKKILVEKWGLNSEQWTAEDVHDAVASLSVDLISAVRKCSMPQDFIDSSNKISRNEKHGTSLDCLKLRTCNNGNQGKDVVPAECFSHAASQHATAMEDMALNEESTKLDLKFVFRDGVLVHMDPDKDVKVHCKFENLCLCSLRELIVMKKRPFD* 1870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2937 1869 MobiDBLite consensus disorder prediction 1 111 - -
Gso11g2937 1869 MobiDBLite consensus disorder prediction 1525 1544 - -
Gso11g2937 1869 Gene3D - 619 793 IPR027417 -
Gso11g2937 1869 MobiDBLite consensus disorder prediction 1555 1603 - -
Gso11g2937 1869 Gene3D - 794 859 - -
Gso11g2937 1869 MobiDBLite consensus disorder prediction 1480 1504 - -
Gso11g2937 1869 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 427 534 IPR013083 -
Gso11g2937 1869 MobiDBLite consensus disorder prediction 383 418 - -
Gso11g2937 1869 MobiDBLite consensus disorder prediction 159 267 - -
Gso11g2937 1869 MobiDBLite consensus disorder prediction 171 193 - -
Gso11g2937 1869 ProSitePatterns AAA-protein family signature. 763 781 IPR003960 GO:0005524|GO:0016887
Gso11g2937 1869 CDD AAA 652 793 - -
Gso11g2937 1869 MobiDBLite consensus disorder prediction 308 329 - -
Gso11g2937 1869 Pfam PHD-like zinc-binding domain 453 532 - -
Gso11g2937 1869 MobiDBLite consensus disorder prediction 1662 1691 - -
Gso11g2937 1869 ProSiteProfiles Extended PHD (ePHD) domain profile. 420 532 IPR034732 -
Gso11g2937 1869 Pfam ATPase family associated with various cellular activities (AAA) 658 793 IPR003959 GO:0005524|GO:0016887
Gso11g2937 1869 MobiDBLite consensus disorder prediction 1550 1609 - -
Gso11g2937 1869 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 53 1865 - -
Gso11g2937 1869 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 851 IPR027417 -
Gso11g2937 1869 SMART AAA_5 654 795 IPR003593 -
Gso11g2937 1869 PANTHER AAA DOMAIN-CONTAINING 53 1865 IPR045199 -
Gso11g2937 1869 MobiDBLite consensus disorder prediction 23 64 - -
Gso11g2937 1869 Pfam AAA+ lid domain 819 851 IPR041569 -
Gso11g2937 1869 MobiDBLite consensus disorder prediction 404 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2937 Gso-Chr11 45127755 45135689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2937 620 855 Calmodulin-binding Proteins AT3G56690 40.756 1.49e-44 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2937 - - gmx:100803849 3620.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1919 12 43102389 43110808 Gso11g2937 11 45127755 45135689 GST