Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2912 ATGGCTACCTTCTCCAAGGAACGCGAGAACTTTGTATACGTTGCCAAGTTAGCTGAACAAGCTGAACGCTATGATGAAATGGTGGATGCCATGAAGAAGGTGGCGAAGCTGGACGTTGAGTTGAGTGTGGAAGAGAGGAACCTGTTCTCTGTTGGGTACAAGAATGTGGTGGGGTCACGGAGAGCTTCATGGAGAATCTTGTCATCGATAGAGCAGAAAGAGGATTCCAAAGGGAATGAGTTGCATGTTAAGCATATCAGGGATTACAGGAACAAGGTGGAGTTGGAGCTGTCCAACATTTGCAGTGACATTATGATAATTTTAGATGAGCATCTTATTCCATCCACTAATATTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGACTATTACCGGTATTTGGCAGAATTTAAAGCTGGCAATGAAAAGAAAGAGGTGGCAGATCAGTCACTTAAAGCATATCAGACAGCTTCTACCACTGCTGAGAGTGAACTACAACCTACACATCCTATTCGTTTGGGTCTGGCTCTAAATTTCTCAGTGTTTTATTATGAGATATTAAATTCACCTGAAAGGGCCTGCCATCTTGCAAAGCAAGCCTTTGATGATGCTGTCTCGGAGCTGGATACCCTGAATGAGGATTCTTACAAGGACAGTACCTTGATTATGCAGCTGTTGAGGGATAACCTTACTTTATGGACTTCTGATATCCCCGAAGAGGGTGAGGACCTAAAAATGGAAAGCGCAGCCAGGGTTGATCAAGGAGAAGATGAGTTAGGCCGCTAA 792 0.4369 MATFSKERENFVYVAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEDSKGNELHVKHIRDYRNKVELELSNICSDIMIILDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYQTASTTAESELQPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAVSELDTLNEDSYKDSTLIMQLLRDNLTLWTSDIPEEGEDLKMESAARVDQGEDELGR* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2912 263 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Gso11g2912 263 PANTHER GENERAL REGULATORY FACTOR 2 3 263 - -
Gso11g2912 263 SMART 1433_4 8 249 IPR023410 -
Gso11g2912 263 Pfam 14-3-3 protein 15 236 IPR023410 -
Gso11g2912 263 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Gso11g2912 263 Coils Coil 14 34 - -
Gso11g2912 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Gso11g2912 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Gso11g2912 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Gso11g2912 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Gso11g2912 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Gso11g2912 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Gso11g2912 263 PIRSF 14-3-3 2 248 IPR000308 -
Gso11g2912 263 Gene3D - 2 250 IPR036815 -
Gso11g2912 263 PANTHER 14-3-3 PROTEIN 3 263 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2912 Gso-Chr11 44875806 44879668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2912 5 260 14-3-3 family AT2G42590 75.194 4.21e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2912 K06630 - gmx:100806167 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1939 12 43332895 43337026 Gso11g2912 11 44875806 44879668 GST