Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g2901 | ATGAAGAGGAACAGTTTGATCATGAAAGACTACACTCATCATCACAGTTGTGTCAACAACAAGAACCCAACAACAACAAAAGAATTTTCCCATGTTGTTGCCAACTGCTACAACAACAACAACATTCACAGCAATAATAATATTGCAGATCAGAATGACTATGTGAATGGCTTCCCATGGCCACCAAGATCATACACTTGTAGCTTCTGCAGAAAGGAGTTCAGGTCTGCTCAGGCACTTGGTGGACACATGAATGTTCATAGGAGGGATAGAGCAAGGTTGAGGCAGTCATCACCCCCAACTCATCATGAAGTTCATCAAGGTCAAGCTCAAGGCCCTATGCTCAACCTTAATCTTAACCCTAACAGCAACTCATCTTTGTCATTGTTACCACCACCACCATCATCTTCAGCAACAACTACTACTACTCTTAAGCCTGTTTTCACTTGCACATTGCCCTTGTTTGTTTCTCCCACTCCTCCTTCACCTTCTTCCGAGTTGAAGAGATGGGTTGTTGTGGATGGTATTGCATTGAACCCTTTGAGCAAAAAGACCAGTACCCCAGAGCACTACTCCAAGTCAAAGATTCCAGAATCTTTATCATCAGCTGGAGTTGGAGAATATCATCATGATCAAGCTTTTGCAAGGGAAGATGGGTGCAAAGTGTTGAAGAAAGGTGGTGACATTCTCAGGATGGACTTGGAGATAGGTTTGCCTAGAGGTTATGATTTGGATCTGGAGCTTCGTTTGGGTACTACCTACTCTTAG | 768 | 0.4323 | MKRNSLIMKDYTHHHSCVNNKNPTTTKEFSHVVANCYNNNNIHSNNNIADQNDYVNGFPWPPRSYTCSFCRKEFRSAQALGGHMNVHRRDRARLRQSSPPTHHEVHQGQAQGPMLNLNLNPNSNSSLSLLPPPPSSSATTTTTLKPVFTCTLPLFVSPTPPSPSSELKRWVVVDGIALNPLSKKTSTPEHYSKSKIPESLSSAGVGEYHHDQAFAREDGCKVLKKGGDILRMDLEIGLPRGYDLDLELRLGTTYS* | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g2901 | 255 | Pfam | C2H2-type zinc finger | 65 | 89 | - | - | |
Gso11g2901 | 255 | SUPERFAMILY | beta-beta-alpha zinc fingers | 62 | 92 | IPR036236 | - | |
Gso11g2901 | 255 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 67 | 87 | IPR013087 | - | |
Gso11g2901 | 255 | Gene3D | Classic Zinc Finger | 61 | 117 | - | - | |
Gso11g2901 | 255 | MobiDBLite | consensus disorder prediction | 101 | 141 | - | - | |
Gso11g2901 | 255 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 65 | 92 | IPR013087 | - | |
Gso11g2901 | 255 | PANTHER | OS07G0101800 PROTEIN | 8 | 255 | - | - | |
Gso11g2901 | 255 | MobiDBLite | consensus disorder prediction | 96 | 141 | - | - | |
Gso11g2901 | 255 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN | 8 | 255 | - | - | |
Gso11g2901 | 255 | SMART | c2h2final6 | 65 | 87 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g2901 | Gso-Chr11 | 44769510 | 44770985 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g2901 | 46 | 251 | C2H2 Transcription Factor Family | AT3G23130 | 41.827 | 1.37e-33 | 119 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Gso11g2901 | zf-C2H2_6 | 1.2e-06 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g2901 | - | - | gmx:100793786 | 463.766 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g1949 | 12 | 43446448 | 43447987 | Gso11g2901 | 11 | 44769510 | 44770985 | GST |