Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2887 ATGGAGAACCAGCTTCCAAATGGCAAAAAGGCATTGGAAGAAGAGTTAATCAGAGGGCATGGCATGGCAAATCAGTTACTTGAAGTACTTGTTCAGGATAAATTGAACACTCACCTTGAAGAGGAGGGTAGCTCAAAGTCAGTGTTACCATTTGTTGAAGATCTTGTTCGCAAAGTGTTGTGTTCATTCACAAATACCCTTTTGATTTTGAACTCCAATAATGATGTTTCCAATGAGGTCGCAGCGTCTATCACTCTCAGAGATGTCTCTTCGTCCATTAATTGCCCAAAGCTGCAGTCGGTGGATGAAACTTGCAAGAGTCCCAATATTCTCAACCCTAAAAGTGGAAGCGGGTGCTACAAAAGAAAATCAATTGCGCCAACTTGGAAAAAGGACAGCTCAATACTGATTGAAGATGGCTATACATGGAGAAAGTACGGACAAAAAATGACGCAGTCCAAATACCTCAGGAGCTACTATAGGTGCACTCACAAAAATGATCAGGGATGCCAAGCAATCAAACAAGTACAGAGAATTCAAGATAACCCTCCATTGTACCGAACAACCTATTATAGCCACCACACTTGTAAAAGCCCTATGAATCCCGAGATCATTGTGGAACCTTTTTCTCCCTCTGCCTCTTCCATATTACTTAGCTTCGATAACAACCTTCAGAGCAAACAAGAAAACCCGTTTTCCTCATCAATACTTGCATCAACCAAACATGAGCCCCAGGAAGTGATTCACAATGAACATAGTGCTCAAAATAAATTGTCTACATTTGAAAACCTCCTATTTTACGATTATGACATTCCTTTTGATTATTCGAGGAATGCCACTTTGCTATCATCGACTGAAGCCGTTCAATTTGAGAATGTTTATGAGCAGTATGGATTTTGA 900 0.4044 MENQLPNGKKALEEELIRGHGMANQLLEVLVQDKLNTHLEEEGSSKSVLPFVEDLVRKVLCSFTNTLLILNSNNDVSNEVAASITLRDVSSSINCPKLQSVDETCKSPNILNPKSGSGCYKRKSIAPTWKKDSSILIEDGYTWRKYGQKMTQSKYLRSYYRCTHKNDQGCQAIKQVQRIQDNPPLYRTTYYSHHTCKSPMNPEIIVEPFSPSASSILLSFDNNLQSKQENPFSSSILASTKHEPQEVIHNEHSAQNKLSTFENLLFYDYDIPFDYSRNATLLSSTEAVQFENVYEQYGF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2887 299 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 292 IPR044810 GO:0003700
Gso11g2887 299 SMART WRKY_cls 137 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso11g2887 299 Pfam WRKY DNA -binding domain 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso11g2887 299 ProSiteProfiles WRKY domain profile. 132 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso11g2887 299 Gene3D WRKY domain 122 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso11g2887 299 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 292 - -
Gso11g2887 299 SUPERFAMILY WRKY DNA-binding domain 134 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2887 Gso-Chr11 44631973 44634349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2887 15 196 WRKY Transcription Factor Family AT3G56400 37.500 2.54e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso11g2887 WRKY 9.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2887 - - gmx:100792193 601.282