Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2885 ATGGAAAATCAGCCATCAAATGGAAGAAAGGCAATAGAAGAAGAACTAATCAAAGGGCGTGACATAGCAAACCAGTTACTTGAAATACTTGCTCCTAAATCCAATACTACTCAACATAAGGGTGTAGAAGTGGAAGCGTTAGTGTTACCATTTGCTGAAGATCTTGTTCGCAAGGTTCTCAGATCACTCACAAATACCCTTTTGCTATTGAACACTCATAGTGATCATGTCTCCGATGAGGTTGTTTTGCCTGTCACTATCAAAGGTGTCTCTTCGTCCGTGAAATGCCAAAAGCCTGAGTATAAGGATGAGTCTTTCAACGCTAAAAGACGAAGTGGGAGCTACAAGAGAAATGCACCAACATGGGAGAAGAACAGTTCAATTCTGATGGAAGATGGCTATGCATGGAGAAAGTATGGACAAAAAATGACAATGAATGCAAAATACCTCAGGAACTACTACAGATGCACTCACAAGTATGATCAGGGTTGTCTAGCAACCAAACAGGTCCAAAGAATTCAAGAAGATCCTCCGTTGTACCATACAACTTATTATGGCCATCACAATTGCAAAAGCTCTTTAATGTTGGAACCAGCTTCTTCTTCTGACTCTTCTATGTTTCTTAGTTTCAGTAACACCTTCCCAAGCAAAGCAGAATACCCATTTTCATCATCACTTTATTCATCCATGAAACAGGAGCCTATGGAAGTGATTCATGAAGACCATATTGTTCACAACCAATTACCCTCATCAGATTACCACATGTTATGTGACTATGATCTTGATTTTAATTATTCGAGGTATGGTACTATGCTATCCTCCACTGAATCTGTACAATTTGATGAAGTTTGTCGGAGTGATCAGGAATTTGATGGCTAG 879 0.3948 MENQPSNGRKAIEEELIKGRDIANQLLEILAPKSNTTQHKGVEVEALVLPFAEDLVRKVLRSLTNTLLLLNTHSDHVSDEVVLPVTIKGVSSSVKCQKPEYKDESFNAKRRSGSYKRNAPTWEKNSSILMEDGYAWRKYGQKMTMNAKYLRNYYRCTHKYDQGCLATKQVQRIQEDPPLYHTTYYGHHNCKSSLMLEPASSSDSSMFLSFSNTFPSKAEYPFSSSLYSSMKQEPMEVIHEDHIVHNQLPSSDYHMLCDYDLDFNYSRYGTMLSSTESVQFDEVCRSDQEFDG* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2885 292 SUPERFAMILY WRKY DNA-binding domain 127 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso11g2885 292 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 282 - -
Gso11g2885 292 ProSiteProfiles WRKY domain profile. 125 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso11g2885 292 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 282 IPR044810 GO:0003700
Gso11g2885 292 Gene3D WRKY domain 118 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso11g2885 292 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso11g2885 292 Pfam WRKY DNA -binding domain 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2885 Gso-Chr11 44618909 44620878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2885 12 233 WRKY Transcription Factor Family AT3G56400 31.330 3.54e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso11g2885 WRKY 2.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2885 - - gmx:102663141 578.556