Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2882 ATGACGTCCGTCGCGAGGCAGCCAACGTGGAAGGAGCGGGAGAACAACAAGAGGCGAGAGAGGAGGAGGAGAGCCATCGCGGCGAAGATCTTCTCCGGCCTGCGAATGTACGGCAACTACAAGCTCCCCAAACACTGCGACAACAACGAAGTTCTCAAGGCTCTCTGCAACGAAGCCGGCTGGACCGTAGAAGCCGATGGCACCACCTATCGCAAGGGATGCAAGCCTCCTGTTGAACGCATGGACATAGTAGGTGGTTCTGCAGCAGCAAGCCCATGCTCATCTTACCATCCAAGTCCCTGTGCTTCCTACAACCCTAGTCCAGGCTCTTCTTGCTTACCGAGCCCTCGCGCATCCCCCTTTCCTCCAAACCCAAATGCTGATGGCAATTCTCTCATTCCATGGCTCAAAAACCTTTCATCAGGATCATCATCGGCATCCTCTTCCAAGCTTCCGCAGCTGTACATTCCGAATGGCTCCATCAGTGCTCCAGTCACTCCTCCAATCAGCTCTCCATCATCCCGAAAGCCCCAGATCAGAGCTGATTGGGAGGATCAGTCCAATTGTCCGACAGCGTGGGGCGGACCGGCATACACCTTTGTGCCCTCTTCAACTCCTCCAAGCCCCGGCCGCCAGGTTGCCGAAACAGATTGGTTTTCCAAGATCAGGATTCCTCAGGGAGGACTAGCACCAACTTCTCCAACCTTCAGCCTGGTCTCTTCCAACCCATTTGGCCTCAAGGAAGATGCTATGGTTGGCAGCGGTTCCCGGATGTGGACGACACCAGGGGCAAGTGGAACATGTTCTCCAGCCGTAGCTGCAGGCTCCGAAAACACTTCTGACATTCCAATGGCTGAAGCAGTTTCAGATGAATTTGCCTTTGGAAGCAGCTCATCAGGTTTAGTGAATGCCTGGAAAGGAGAGAGGATCCATGAAGCTTCTTTTGGAACAGATGATCTTGAGCTCACTCTTGGGAGCTCCAAGACCAGGTTGCTCCATAAGTGA 1005 0.5393 MTSVARQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEADGTTYRKGCKPPVERMDIVGGSAAASPCSSYHPSPCASYNPSPGSSCLPSPRASPFPPNPNADGNSLIPWLKNLSSGSSSASSSKLPQLYIPNGSISAPVTPPISSPSSRKPQIRADWEDQSNCPTAWGGPAYTFVPSSTPPSPGRQVAETDWFSKIRIPQGGLAPTSPTFSLVSSNPFGLKEDAMVGSGSRMWTTPGASGTCSPAVAAGSENTSDIPMAEAVSDEFAFGSSSSGLVNAWKGERIHEASFGTDDLELTLGSSKTRLLHK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2882 334 MobiDBLite consensus disorder prediction 107 126 - -
Gso11g2882 334 MobiDBLite consensus disorder prediction 161 180 - -
Gso11g2882 334 MobiDBLite consensus disorder prediction 194 213 - -
Gso11g2882 334 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 330 IPR033264 GO:0003700|GO:0006351|GO:0009742
Gso11g2882 334 MobiDBLite consensus disorder prediction 1 21 - -
Gso11g2882 334 Pfam BES1/BZR1 plant transcription factor, N-terminal 5 140 IPR008540 -
Gso11g2882 334 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 330 - -
Gso11g2882 334 MobiDBLite consensus disorder prediction 161 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2882 Gso-Chr11 44581492 44585655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2882 1 330 BZR Transcription Factor Family AT1G78700 66.667 3.03e-124 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Gso11g2882 BES1_N 2.7e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2882 - - gmx:100795898 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1957 12 43576823 43581128 Gso11g2882 11 44581492 44585655 GST