Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2877 ATGCCAATCAGCATGAAGACCATCATTTCCTCTCAATTTGTCCTCCTTTCACTCCTTCCAATTTGCTTCACATGGCTTGCTTTTGGAGCCAACAAACTGCCACAAAATGAGGTGGATGCGCTGAAGGAGATAGCTAAAACACTTGGTAAGGAGAATTGGGACTTCAGTGTAAATCCATGCTACAGCTGGAATCTTTCCAAAGACAATATGGTTTCTTGCAATTGCGATATTTCTAATGACAGTTTCTGCCATGTCATGAAAATAGCTCTGAAATCACAAAATCTTCGAGGCAATCTTCCCCCACAACTGATCGAATTACCTTATCTCCAAGAGATTGAACTCAGCCGTAACTACCTTAGTGGTACAATTCCTAGACAATGGGGCTCCTCCAACCTTCAAAAAATTTCTCTTCTTGGAAACCGAATAACTGGCCCAATCCCAAAAGAGCTGGGAAAACTCACCAATCTTACACGCTTGATCCTTGAGTTCAATCAACTCTCTGGAAAGCTTCCTTCAGAACTTGGGAATCTTGTCCTCATTAAACAACTACATCTAAGCTCCAATAACTTCACTGGTCCATTGCCAGCAACTCTTGCGAGGCTTACTACAATGGATGAATTTCGAATTAATGACAACCAGTTTTCTGGCAACATACCTGATTTTATTGGAAGTTGGAAAAGTCTTGATCAACTACATATGCAAGGGAGTGGTTTAAGTGGACCAATTCCTTCGGGAATTTCACTTCTAAACTTAACTGATTTGAGGATTAGTGACTTAAATGGACCTGATTCAACTTTTCCACGACTAGAAAATATGACATATCTGAAATATTTGATATTAAGGAGTTGCAATATCAATGACACATTTCCTCAGTATCTTGTAAGGCTATCACGTTTGCAAATTTTAGACCTCAGCTATAACAAATTAAATGGACCAGTCCCGAAAAACCTTCAAGAAGTAGCATTAGCAAGCTACATATATTTAACTGGAAACTTCCTCACTGGACTGGTACCTGAGTGGACAAGTGCCAATAATAAAAATTTAGATCTTTCATATAACAACTTCAGTGTTGAAGACCGAGAGTCAAAGATATGTTACCAGAAAACTGCGAACTTGTTTGGAAGCTTTTCAAGGACTAACTTAGGACCAGTTTCTTGTGAGAACAGCACTAGAACCTGTACTAAGAATGTTCAATCTCTATATATAAATTGTGGTGGAAAGCAGGTTGTTGTTGGAGGTATAACATATGATGAAGATATGGATTCAGCTGGACCAGCAGTGTATAAACAGAGTAGAAACAACTGGGCATTTAGCAACACAGGTCAATTCATGGACAATAATACTTTAGCTATACAAGGAAAGCTTCCCGCCTATACCACAGAAAATGAAACCAGGCTTTATATGACGGATGCCGAATTATATAAGAATGCGCGTATTTCCCCCATGTCTTTGACTTATTATGGATTTTGCTTGGAAAATGGAGACTACACAGTAAAGCTTCACTTTGCTGAGATAATGTTTACAGCTGATAGCACATATAGCTGCTTAGGGAGGCGTCTATTTGATGTATATATTCAGGGAAGGCGAGTACTGAAGGATTTCAACATTGCTAATGAAGCACAAGGAGTTGGAAAGGAACTCATAAAAGAATTTCCTGCTCATGTGAGTACTAATGACTTAGAGATCCGCTTCTATTGGGCAGGCAAAGGGACAACAAATATCCCGTATAAATCAGTATATGGTCCTCTTATATCCGCTATTTCTGTCAAGTATGCTCAGTATGACTCTACAGGTGACATGTCTGCAGGAGTTATTGTTGCAATTGTAGCTGCATTAGTGATTGTTGTCATCTTGATTGTTCTTGGCATACTTTGGTGGATGGGTTTCATTGGTGATTGTTGTTGGAATGCTTCGGTGGAAGGGTTATTGTCAACGTCAAACTTCCTGCCTCATTTTGGTCGAAAGAAACATTTATTAATGAAAGAGCTCAGAGATCTAGATCTACAAACTGGTGTATTTACCTTACATCAAATCAAAGTTGCAACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGCTTTGGTCCTGTTTATAAGGGCATTCTGTCAAACAGCAAACCAATAGCAGTCAAACAACTATCACCTAAATCAGAGCAAGGAACCCGTGAGTTTATAAATGAGATAGGCATGATCTCTGCTTTGCAACACCCTAATCTTGTTAAACTTTATGGCTGTTGTGTTGAGGGAGATCAATTGTTGCTAGTATACGAATATATGGAAAACAATAGCCTTGCACATGCGTTATTTGACTCAGGAGATAGACATTTGAAATTGAGTTGGCCAACAAGGAAGAAGATTTGTGTTGGTATTGCTAGAGGTTTAGCTTTCATGCATGAAGAATCAAGACTAAAAGTTGTTCACAGGGATTTAAAGACCTCTAATGTGTTGCTTGATGAAGACCTAAACCCAAAGATATCTGATTTTGGTTTGGCCAGGCTTCGTGAGGGAGACAATACTCACATAAGCACCAGAATTGCAGGGACTTGGGGATATATGGCTCCTGAGTATGCAATGCATGGTTATCTGACCGAAAAGGCAGATGTTTATAGTTTTGGGGTTATTACCATAGAAATTGTAAGTGGAAAAAGAAACACTATTCACCAATCAAAGGAGGAAGCATTTTATCTTCTTGATTGGGCACGTTTGTTGAAAGACAGAGGTAGCATAATGGAGCTAGTTGATCCAAGGTTGGGTATAGATTTCAATGAAGAGGAGGTAATGTTGATGGTCAAAGTGGCTCTCCTATGCACCAATGTCACTTCAACCCTTAGGCCCTCCATGTCTACTGTGCTAAACATGCTTGAGGGCAGAACGGTAGTTCCAGAATTTGTTGCACTGTCAAGTGAGGTATTGGATGAGATGAAGTTGGGGATAATGAGAGAGTTTTACAGTCAAATGGAAGAAAATAACACAAGTGAGGCACGAAGTTTGAGCTTGACAATGGATGTTCCATGGACTTGTTCATCTTCATCAGCTGTAGATCTCAATCCGGCTCACCTTGATGCTTCCTGTTGGGAGAAAAAGAAATTAAGAGAGTCTGTATGA 3111 0.3944 MPISMKTIISSQFVLLSLLPICFTWLAFGANKLPQNEVDALKEIAKTLGKENWDFSVNPCYSWNLSKDNMVSCNCDISNDSFCHVMKIALKSQNLRGNLPPQLIELPYLQEIELSRNYLSGTIPRQWGSSNLQKISLLGNRITGPIPKELGKLTNLTRLILEFNQLSGKLPSELGNLVLIKQLHLSSNNFTGPLPATLARLTTMDEFRINDNQFSGNIPDFIGSWKSLDQLHMQGSGLSGPIPSGISLLNLTDLRISDLNGPDSTFPRLENMTYLKYLILRSCNINDTFPQYLVRLSRLQILDLSYNKLNGPVPKNLQEVALASYIYLTGNFLTGLVPEWTSANNKNLDLSYNNFSVEDRESKICYQKTANLFGSFSRTNLGPVSCENSTRTCTKNVQSLYINCGGKQVVVGGITYDEDMDSAGPAVYKQSRNNWAFSNTGQFMDNNTLAIQGKLPAYTTENETRLYMTDAELYKNARISPMSLTYYGFCLENGDYTVKLHFAEIMFTADSTYSCLGRRLFDVYIQGRRVLKDFNIANEAQGVGKELIKEFPAHVSTNDLEIRFYWAGKGTTNIPYKSVYGPLISAISVKYAQYDSTGDMSAGVIVAIVAALVIVVILIVLGILWWMGFIGDCCWNASVEGLLSTSNFLPHFGRKKHLLMKELRDLDLQTGVFTLHQIKVATNNFDISNKIGEGGFGPVYKGILSNSKPIAVKQLSPKSEQGTREFINEIGMISALQHPNLVKLYGCCVEGDQLLLVYEYMENNSLAHALFDSGDRHLKLSWPTRKKICVGIARGLAFMHEESRLKVVHRDLKTSNVLLDEDLNPKISDFGLARLREGDNTHISTRIAGTWGYMAPEYAMHGYLTEKADVYSFGVITIEIVSGKRNTIHQSKEEAFYLLDWARLLKDRGSIMELVDPRLGIDFNEEEVMLMVKVALLCTNVTSTLRPSMSTVLNMLEGRTVVPEFVALSSEVLDEMKLGIMREFYSQMEENNTSEARSLSLTMDVPWTCSSSSAVDLNPAHLDASCWEKKKLRESV* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2877 1036 Gene3D Ribonuclease Inhibitor 35 197 IPR032675 -
Gso11g2877 1036 SUPERFAMILY L domain-like 73 312 - -
Gso11g2877 1036 CDD STKc_IRAK 691 958 - -
Gso11g2877 1036 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 382 992 - -
Gso11g2877 1036 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 280 356 - -
Gso11g2877 1036 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 286 - -
Gso11g2877 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Gso11g2877 1036 SMART serkin_6 685 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2877 1036 SUPERFAMILY Protein kinase-like (PK-like) 668 966 IPR011009 -
Gso11g2877 1036 Pfam Malectin domain 400 587 IPR021720 -
Gso11g2877 1036 Gene3D Phosphorylase Kinase; domain 1 652 760 - -
Gso11g2877 1036 Gene3D Transferase(Phosphotransferase) domain 1 761 967 - -
Gso11g2877 1036 Gene3D Ribonuclease Inhibitor 201 372 IPR032675 -
Gso11g2877 1036 PANTHER PUTATIVE-RELATED 280 356 - -
Gso11g2877 1036 PANTHER PUTATIVE-RELATED 382 992 - -
Gso11g2877 1036 PANTHER PUTATIVE-RELATED 77 286 - -
Gso11g2877 1036 Pfam Protein kinase domain 687 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2877 1036 Gene3D - 398 593 - -
Gso11g2877 1036 ProSiteProfiles Protein kinase domain profile. 685 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2877 Gso-Chr11 44484419 44497430 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2877 33 1016 Receptor kinase-like Gene Family AT1G53420 49.648 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g2877 Pkinase 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2877 - - gmx:100791136 2048.09