Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2875 ATGAAGAAGATCACTTCCTCTCAATTTCTTCTCTTCCTTTCACTCCTTGCTTTATGGTTCACATCGATTGCTTTTGGAGCTGATACCACTCACCCAGAAGAAGTGCAAGCTCTGAAAGATATGGGCAAGACGCTTGGTAAGAAGGAATGGGACACTGACATAGATCCATGCTCAGGACAACCTCCCTGGTTCACATCTAAGGAGAACAACAATGTCACTTGCAATTGCACTATCCCCGGTGAAAACTTCTGCCATGTTGTAATAATATTGCTGAAATCACAAAATCTTCGAGGCATGCTCCCACGCGAACTGATAAGGTTACCTTACCTTGAAGAAATTGACCTCACAAAAAACTACCTTAACGGTACTATACCTACCCAATGGGGCTCCTCCAATCTTCGCAGCATTTCTCTTTATGGAAATCGACTAACTGGTCCAATCCCAAAAGAGATAGCAAACATCACCAACCTCCAAAATTTGGTTTTGGAATTCAATCAATTTTCTGGAAATCTACCTCCAGAACTTGGGAACCTTCCAAGCATTCAGAAATTGCATCTTACCTCTAACAACTTTACCGGAGAGCTTCCTGAAACTTTGGCTAAACTTACAACATTGACAGAACTCCGACTTAGTGACAATCAATTCTCTGGAAAGATACCTGATTTCATTCAAAGATGGACCGATCTGGAAATGTTAACAATTCAAGGGAGTGGTTTAAGTGGGCCAATTCCTTCTGAAATTTCGTTTCTGCAAAACTTATACGACCTGAGAATTAGTGACTTGAATGGATCTGATTCTGCTTTTCCACCAATTAATAATATGACAAAAATGAAAATATTGATACTAAGAAGTTGTCATATTAATGACACATTACCTCAATATCTTGGGAACAAGACAAACTTTAATGACATGCAAGTCTTAGACCTGAGCTATAACAAATTAAGCGGAAACATTACAGAAGCCTTTCAAGACCTACTAGGATTGACTTACTTATATTTCACTGGAAACTCGTTCACTGGACCAATACCCAACTGGGTAGGAAATGCTAAACGTCCCATTGATATTTCGTATAACAACTTTAGCAATGAACCCCCGCAACAACAGTCATGCCAACAGATCCAAAACCCAACAGTGAACTTGTTTGAAAGCTTTCCAATGAGCCAAAATGGACCTATTCACTGTCTGACGACAACCAATGATTGTCCTAAAACCTTTAACTCTTTCCATATAAATTGTGGTGGTGAAAGGGAGCTAAGTAGTGAAGGTATAGTATATGATCCAGATTTAGATCCATCAGGAGCAGCAACGTCTAAAATCATGGGTTCAAATTGGGCATTTAGTAACACCGGTCACTTCTTGGATGCCCAAAAACCTGTATCAGAAACCTATATCCAGCAACAAAATAAAACCGGGCTTTCTAAACTATATCAAACCGCACGTGTATCCCCCATTTCTCTGACTTATTATGGATTTTGTCTGGAAAATGGAGACTACACAGTATTGCTCCATTTTGCAGAGATCATGTTCACTGATGACAACACATATAGCAGCTTAGGGAGGCGTATATTTGATGTTTACATTCAGGGAGTGCAGGTGATGAAGGATTTCAATATTGCAAATGAAGCAGGAGGAGTTGGAAAGAATATTACAAGATCATTTCCTGCTCATGTGAGGAATAACTCTTTAATAATCCGATTTTATTGGGCTGGAAAAGGGACAACTGCTATCCCATATGGCCCTCTTATATCAGCTATATCTGTCACTCATGTCTCTACAACTACAAGTGGCAGCATGTCTACAGGGGTTATAGTTGGAATAGTAGTTGCTGCAATTGTTCTTGTCATCCTAATCGTACTTGGGTGGAGAATTTATATTGGGAAAAGAAATTCATTTGGAAAAGAGTTAAAGGATTTAAATCTGCAAACGAATTTATTTACTATGCGTCAGATCAAAGTTGCAACAAACAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGCTTTGGTCCTGTCTATAAGGGCATTTTATCAAATGGCATGATAATAGCTGTCAAGATGCTTTCATCCAAGTCAAAGCAAGGAAATCGTGAGTTTATAAATGAGATAGGCTTGATTTCAGCCTTGCAGCACCCTTGTCTTGTTAAACTATATGGTTGTTGCGTTGAAGGAGATCAATTGTTGCTAGTATATGAATATATGGAAAACAATAGCCTTGCACAAGCTTTATTTGGTAACGGAGCATCTCAATTAAAATTGAATTGGCCAACAAGGCACAAGATCTGCATTGGTATTGCTAGAGGTTTGGCTTTCTTACATGAAGAATCAACATTAAAAATTGTTCACAGGGACATTAAGGCCACCAATGTGTTACTGGACAAAGACTTAAACCCAAAAATATCTGATTTTGGTCTAGCCAAGCTCGATGAGGAGGACAATACTCACATAAGCACAAGAGTAGCTGGGACTTATGGATATATGGCTCCAGAATATGCAATGCATGGTTATTTGACAGACAAAGCTGATGTCTATAGTTTTGGAGTTGTTGCCTTGGAAATTGTATCTGGAAAGAGCAATACCATCCACCGATCCAAGCAAGAAGCATTGCATCTTCTAGATTGGGCACATTTATTGAAAGAGAAGGGTAACCTAATGGAGCTAGTTGATAGAAGGTTAGGTTCAGATTTCAATGAAAATGAGGTAATGATGATGATCAAAGTGGCGCTCCTATGCACCAATACCACTTCAAACCTTAGGCCCACCATGTCATCGGTGCTTAGTATGCTAGAAGGAAAAACTATGATTCCAGAATTTGTTTCAGATCCATCTGAGATAATGGATGAAATGAAGTTAGAGGCAATGCGACAACATTACTTTCAAAAAGAAAATGAGAGAAGTGAGACACAAGAGCAAAATCATAGTTTATCAATTGAGGGGCCTTGGACGGCCTCATCTTCATCGGCTGCAGATCTATATCCTGTCCACGTTGATTCTTCCTATTGGGAGAAAAGAAATTAG 3015 0.391 MKKITSSQFLLFLSLLALWFTSIAFGADTTHPEEVQALKDMGKTLGKKEWDTDIDPCSGQPPWFTSKENNNVTCNCTIPGENFCHVVIILLKSQNLRGMLPRELIRLPYLEEIDLTKNYLNGTIPTQWGSSNLRSISLYGNRLTGPIPKEIANITNLQNLVLEFNQFSGNLPPELGNLPSIQKLHLTSNNFTGELPETLAKLTTLTELRLSDNQFSGKIPDFIQRWTDLEMLTIQGSGLSGPIPSEISFLQNLYDLRISDLNGSDSAFPPINNMTKMKILILRSCHINDTLPQYLGNKTNFNDMQVLDLSYNKLSGNITEAFQDLLGLTYLYFTGNSFTGPIPNWVGNAKRPIDISYNNFSNEPPQQQSCQQIQNPTVNLFESFPMSQNGPIHCLTTTNDCPKTFNSFHINCGGERELSSEGIVYDPDLDPSGAATSKIMGSNWAFSNTGHFLDAQKPVSETYIQQQNKTGLSKLYQTARVSPISLTYYGFCLENGDYTVLLHFAEIMFTDDNTYSSLGRRIFDVYIQGVQVMKDFNIANEAGGVGKNITRSFPAHVRNNSLIIRFYWAGKGTTAIPYGPLISAISVTHVSTTTSGSMSTGVIVGIVVAAIVLVILIVLGWRIYIGKRNSFGKELKDLNLQTNLFTMRQIKVATNNFDISNKIGEGGFGPVYKGILSNGMIIAVKMLSSKSKQGNREFINEIGLISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLAQALFGNGASQLKLNWPTRHKICIGIARGLAFLHEESTLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVSGKSNTIHRSKQEALHLLDWAHLLKEKGNLMELVDRRLGSDFNENEVMMMIKVALLCTNTTSNLRPTMSSVLSMLEGKTMIPEFVSDPSEIMDEMKLEAMRQHYFQKENERSETQEQNHSLSIEGPWTASSSSAADLYPVHVDSSYWEKRN* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2875 1004 Coils Coil 950 970 - -
Gso11g2875 1004 SUPERFAMILY Protein kinase-like (PK-like) 640 947 IPR011009 -
Gso11g2875 1004 Gene3D Transferase(Phosphotransferase) domain 1 733 939 - -
Gso11g2875 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Gso11g2875 1004 ProSiteProfiles Protein kinase domain profile. 657 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2875 1004 Gene3D Ribonuclease Inhibitor 296 379 IPR032675 -
Gso11g2875 1004 SUPERFAMILY L domain-like 68 375 - -
Gso11g2875 1004 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 74 973 - -
Gso11g2875 1004 Gene3D Phosphorylase Kinase; domain 1 625 732 - -
Gso11g2875 1004 Gene3D Ribonuclease Inhibitor 197 294 IPR032675 -
Gso11g2875 1004 MobiDBLite consensus disorder prediction 959 984 - -
Gso11g2875 1004 Pfam Protein tyrosine and serine/threonine kinase 659 927 IPR001245 GO:0004672|GO:0006468
Gso11g2875 1004 Gene3D Ribonuclease Inhibitor 34 196 IPR032675 -
Gso11g2875 1004 SMART serkin_6 657 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2875 1004 Pfam Malectin domain 407 585 IPR021720 -
Gso11g2875 1004 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 74 973 - -
Gso11g2875 1004 Gene3D - 406 591 - -
Gso11g2875 1004 CDD STKc_IRAK 663 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2875 Gso-Chr11 44461984 44477343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2875 23 989 Receptor kinase-like Gene Family AT1G53420 53.036 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g2875 PK_Tyr_Ser-Thr 5.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2875 - - gmx:100785451 1521.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1964 12 43678706 43692382 Gso11g2875 11 44461984 44477343 GST