Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2870 ATGGATTTTGTAATAAGTAGTATACTTCTCTTGTTGGCATGCATTACTATACACGTTCTCTCAAACACAATAACGAGAAAACGAAACCACAATAAGCTTCCACCAGGACCTTCACCTCTTACCCTTTTGGAAAATCTAGTTGAACTTGGCAAAAAGCCAAAACAAACATTGGCCAAGCTTGCTAGGCTTCATGGCCCCATAATGCGTTTGAAGCTAGGTCAACTAACCACCATAGTTATCTCTTCACCGGACATAGCCAAAGAAGTGTTCCAAACCCATGATTTGTTATTCTCAAACCGAACAATTCCACATTCCACATCTGTTCACAACCATAGTCACAACAGCGTTGCCTTCCTTCCCATTTCACCTCTTTGGCGAGACCTTCGGAAAATATGCAACAATCAATTGTTCTCCCACAAGTCCCTTGATGCAAGCCAAAACCTTAGACGCAAAAAAACCCAAGAACTCCTTGGTGATGTGCATAGAAGTAGCCTTAGTGGTGAAGCTGTGGATATTGGAACTTTGGTTTTTAGGACTTCAATTAATTTTTTGTCGAACATTTTTTTCTCTTTGGATTTTGTCAACTCTGTAGGTGAAACTGAAGAGTACAAGGTTATAGTCGAGAATCTTGGGAGAGCAATTGCAACGCCAAACTTGGAGGATTTTTTCCCGATGTTGAAGATGGTTGATCCACAAGGCATTAGAAGGCGTGCAACCACTTATGTTTCCAAGTTGTTTGCTATTTTTGACCGATTGATTGACAAAAGATTGGAGATTGGAGATGGCACAAATAGTGATGACATGTTAGATATCTTGCTCAACATTTCTCAGGAGGATGGCCAAAAGATTGACCACAAAAAGATTAAACATTTGTTCCTTGATCTTATTGTTGCTGGAACTGATACAACTTCCTACACGATGGAATGGGCAATGGCTGAGTTAATCAACAACCCGGATACAATGTCAAAGGCCAAAAGGGAGCTTGAGCAAACCATTGGAATAGGAAACCCTATTGAGGAATCAGACATTGCAAGACTCCCATATTTACGTGCAATTATAAAAGAGACCTTACGCATGCACCCTGGTGCCCCACTTTTGCTACCTAGAAAAGCCAACGTAGATGTGGAGATCAATGGCTACACCATCCCACAGGGTGCACAAATCATAATTAATGAATGGGCCATTGGAAGAAACCCAAGCGTATGGGAAAACCCTAATTTATTTTCACCCGAAAGATTTTTGGGGTCAGAGATTGATGTCAAAGGTCGACATTTTCAACTCACACCGTTCGGCGGTGGGCGACGAATATGCCCTGGCTTGCCGCTAGCTATAAGAATGTTGCATTTAATGTTGGGATCATTAATCAATGGCTTTGATTGGAAATTTCAAAATGGTGTGAACCCAGATATTGACATGGGTCAACCCTTGCGAGCTGTTCCATTTAGAATAAACAAATAA 1458 0.4115 MDFVISSILLLLACITIHVLSNTITRKRNHNKLPPGPSPLTLLENLVELGKKPKQTLAKLARLHGPIMRLKLGQLTTIVISSPDIAKEVFQTHDLLFSNRTIPHSTSVHNHSHNSVAFLPISPLWRDLRKICNNQLFSHKSLDASQNLRRKKTQELLGDVHRSSLSGEAVDIGTLVFRTSINFLSNIFFSLDFVNSVGETEEYKVIVENLGRAIATPNLEDFFPMLKMVDPQGIRRRATTYVSKLFAIFDRLIDKRLEIGDGTNSDDMLDILLNISQEDGQKIDHKKIKHLFLDLIVAGTDTTSYTMEWAMAELINNPDTMSKAKRELEQTIGIGNPIEESDIARLPYLRAIIKETLRMHPGAPLLLPRKANVDVEINGYTIPQGAQIIINEWAIGRNPSVWENPNLFSPERFLGSEIDVKGRHFQLTPFGGGRRICPGLPLAIRMLHLMLGSLINGFDWKFQNGVNPDIDMGQPLRAVPFRINK* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2870 485 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 483 - -
Gso11g2870 485 Pfam Cytochrome P450 34 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 483 - -
Gso11g2870 485 SUPERFAMILY Cytochrome P450 34 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Gso11g2870 485 Gene3D Cytochrome P450 18 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2870 485 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2870 Gso-Chr11 44430995 44433538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2870 1 484 Cytochrome P450 AT2G45550 43.373 1.92e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2870 - - gmx:100792017 964.526