Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2866 ATGGTTGGATTCCAGAGTGACCATAAGCCCGGGAACAAGTGCAATGGTAATTCTAATAGTTTTCCGGTTCCGGATCGTCATGTACGACTTATGAGAGGAAGAGAGCTAAGAAAAAGCAGCAAGGCATCTCCTGATAGTAATAATATTAGTAATGTGGTTAGTGAATATTCTGAGCATAACCTGCGCTTAAGAGAAGATAATAGTAACTCTGCTGCTCCCTTTGAACGATACCTGGAAGGAGTGGCAGCAGCAGCAGCAGCAGCACGGGGCGCAAGGGAAGATGGGAGACCTTTCAGACAACGGCTTTTGGTGGTGGCCAATAGGCTGCCAGTCTCAGCAATAAGGAAAGGCGAGGATTTGTGGTCTTTGGAGATAAGTGCTGGTGGCCTGGTGAGCGCTCTCTTAGGTGTGAAGGAGTTTGAGGTGAGGTGGATAGGTTGGGCTGGGGTCAATGTGCCCGATGAGATTGGACAAAAGGCACTTACAAAAGCTTTGGCCGAAAAGAGGTGCATTCCAGTATTTCTTGATGAAGAGATTGTTCATCAATATTACAATGGCTATTGCAACAACATTCTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGCCTTGCTACCACCCGGAGTTTCCAATCTCAGTTTGAAGCATATCAGAAAGCAAATCAAATGTTTGCTGCTGTTGTAAACAAACACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCACAATGCTTAAAGAATTATAACCGCAAAATGAAAGTTGGCTGGTTTCTGCATACCCCGTTTCCATCTTCTGAAATTCACAGGACATTGCCATCTCGCTCAGAGCTCTTGCATGCTGTTCTTGCAGCTGATTTGGTTGGTTTTCACACCTACGACTATGCACGACATTTTGTTAGTGCATGTACACGCATTCTTGGACTTGAGGGCACACCTGAAGGGGTTGAGAATCAGGGGAAGCTGACTCGAGTTGCAGCATTTCCAATAGGTATAGACTCAGAACGATTCATACGTGCGCTTGACCTTCCTCAAGTGAAGGAACACATCAAAGAATTACAAGAGAGATTTAAAGGAAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAAAAAATTCTAGCATTTGAAAAATTTTTGGAAGAGAATCGTGATTGGCGTGATAAAGTTGTTCTGCTTCAAATTGCTGTGCCGACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACTAGCCAGGTCCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGAGAACTGACTACTGTTCCCATACATCACCTGGATCGCTCTCTTGATTTTCATGCACTATGTGCTTTGTATGCTGTTACGGATGTAGCACTTGTCACATCTTTGAGGGATGGAATGAATCTTGTAAGTTATGAATTTGTGGCCTGCCAAGATAAAAAGAAAGGGGTTCTCATTCTCAGCGAATTTGCTGGTGCTGCACAGTCACTTGGTGCTGGGGCTATTCTGGTCAACCCTTGGAACATCACAGAAGTTGCTACTGCAATTGCCAAGGCTCTGAATATGCCATCGGCAGAACGAGAGAAGAGACATAAGCATAACTATGAACATGTAAAAACTCACACTGCTCAGGAATGGGCAGAAACTTTTGTAAGTGAACTAAATGATACTGTTGTCGAGGCACAGATAAGGACAAAACAAGTTCCACCACGGCTCCCAACAGAGACTGCAGTTGAACGTTATTTGCAGTCAAATAATCGGTTGCTTATTTTGGGTTTCAATGGAACTTTAACTGAACCAGTTGAGAGAGAAGGTGATCGGTTTAAAGAAAGGGAACTCACTGTGCATCCAGAACTGAAACTGCCCTTGGCAGAATTATGCAGTGACCCAAAGACCACAGTTGTTGTGCTTAGTGGAAGTGGTAGAGCAGTTCTAGATGAAAACTTCAAAGAATATGACATCTGGCTGGCAGCAGAGAATGGGATGTTTTTAAACCCTTCAAAGGGAGAATGGATGACAACAATGCCAGAGCAACTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGATTACTTCACTGACAGAACACCTCGATCATATTTTGAAGAAAGGGAAGCTTCACTTGTATGGAGTTACAGACATGCAGATGCTGAGTTTGGAAGATTGCAAGCGAGGGACATGCTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCATCTGTTGACGTTGTTCAAGGGAGCCGATCTGTTGAGGTGCGAGCTGCTAATGTTACAAAGGGAGCAGCTATTGACCGCATTCTAGGTGAGATAGTCCACAGTAAATTCATGACAACACCAATTGATTACGTTCTGTGTATAGGACATTTTCTGACAAAGGATGAAGATATATACGCCTTTTTTGAGCCAGAGCTACCTTCAATAGGTGTGGGTCTTCAAAGAAGCAAGGGAACAGAAGGAGTAAAGTTTCCAGTTGAGAGGGTATCGTCATTGAAGAACCCAGCAAGTAGAAATGGAGCAGCAAAGTCGTCATCCCAAAAAAAGGGACAACGCCCTGTGTCAAATAATGAGAAGAAAAGAAACAATCATGTCTGCCGCGGGCCACGTCGGCTGGCTCCCGAAAAGATATCTTGGAATGTCCTTGACCTGAAGAAGGAGAATTACTTCTCGTGTGCCGTTGGACGAACACAGACCAATGCTCGGTATACGCTTGGATCACCAGATGAAGTTGTTGCATTTCTCAAGGAACTAGCCAATGTCTGA 2799 0.4391 MVGFQSDHKPGNKCNGNSNSFPVPDRHVRLMRGRELRKSSKASPDSNNISNVVSEYSEHNLRLREDNSNSAAPFERYLEGVAAAAAAARGAREDGRPFRQRLLVVANRLPVSAIRKGEDLWSLEISAGGLVSALLGVKEFEVRWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYQKANQMFAAVVNKHYEEGDVVWCHDYHLMFLPQCLKNYNRKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVENQGKLTRVAAFPIGIDSERFIRALDLPQVKEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENRDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGELTTVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVATAIAKALNMPSAEREKRHKHNYEHVKTHTAQEWAETFVSELNDTVVEAQIRTKQVPPRLPTETAVERYLQSNNRLLILGFNGTLTEPVEREGDRFKERELTVHPELKLPLAELCSDPKTTVVVLSGSGRAVLDENFKEYDIWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKHVFDYFTDRTPRSYFEEREASLVWSYRHADAEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAANVTKGAAIDRILGEIVHSKFMTTPIDYVLCIGHFLTKDEDIYAFFEPELPSIGVGLQRSKGTEGVKFPVERVSSLKNPASRNGAAKSSSQKKGQRPVSNNEKKRNNHVCRGPRRLAPEKISWNVLDLKKENYFSCAVGRTQTNARYTLGSPDEVVAFLKELANV* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2866 932 MobiDBLite consensus disorder prediction 843 863 - -
Gso11g2866 932 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 100 569 - -
Gso11g2866 932 CDD HAD_TPP 599 823 - -
Gso11g2866 932 MobiDBLite consensus disorder prediction 864 878 - -
Gso11g2866 932 Pfam Trehalose-phosphatase 604 828 IPR003337 GO:0003824|GO:0005992
Gso11g2866 932 Gene3D - 601 828 IPR023214 -
Gso11g2866 932 Pfam Glycosyltransferase family 20 101 566 IPR001830 GO:0003824|GO:0005992
Gso11g2866 932 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 101 566 IPR012766 GO:0003825|GO:0005992
Gso11g2866 932 Gene3D Glycogen Phosphorylase B; 93 347 - -
Gso11g2866 932 MobiDBLite consensus disorder prediction 838 878 - -
Gso11g2866 932 TIGRFAM T6PP: trehalose-phosphatase 597 833 IPR003337 GO:0003824|GO:0005992
Gso11g2866 932 SUPERFAMILY HAD-like 598 930 IPR036412 -
Gso11g2866 932 MobiDBLite consensus disorder prediction 1 26 - -
Gso11g2866 932 CDD GT20_TPS 101 566 IPR001830 GO:0003824|GO:0005992
Gso11g2866 932 Gene3D Glycogen Phosphorylase B; 348 551 - -
Gso11g2866 932 Gene3D - 688 768 - -
Gso11g2866 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 930 IPR001830 GO:0003824|GO:0005992
Gso11g2866 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2866 Gso-Chr11 44368648 44389548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2866 10 932 Trehalose Biosynthesis Gene Families AT1G78580 75.607 0.0 1442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2866 K16055 - gmx:100789554 1873.21