Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2857 ATGGAGAAAGAGGAGAGCACGGAACAGCGAAAGCAAGCGAGGCTTGCCATTATGGAGCTCGCCAACATGATAAGCGTTCCCATGGCGCTAAACGCCGTCGTTCGCCTCAACGTCGCCGACGCCATCTGGCAAGGCGGCGCCAACAACCCCCTCTCCGCCGCTGAGATCCTCCCCCGCCTCCTTCCCGCCGGCGGCGGCGACGCCGAGAACCTCCAGCGGCTCCTCCGGATGCTGGCCAGTTACGGCGTCTTCTACGAGCACCTCTCCGCCGGCGAGCGGAAGTACTCCCTCACCGACGTCGGCAAAACGCTTGTCACCGATGAACAAGGCCTGTCGTACGCGCATTACGTGCTCCAACACCACCAGGATGCGTTGATGAGAGCGTGGCCAATGGTGCACGAGGCAGTAGTGGACCCTACAAAGGAGCCCTTCGAGAGGGCAAATGGGGAGCCAGCATATGGATACTATCTGAAGCACCCAGAGATGAATGACCTAATGGTGAGGGCCATGTCAGGGGTGTCAGTGCCCTTCATTAGGGCCATGTTGGAGGGCTATGATGGCTTTCAAGGTGTGGAGAAGCTTGTGGATGTGGGTGGTAGTGGCGGTGATTGCCTTCGTATGATCTTGGAAAAACACCCCACCATCAAAGAAGGGATCAACTTTGACCTACCTGAAGTTGTGGCCAAAGCCCCACAAATCCCATTTGTAACCCATGTGGGTGGTGACATGTTCAAGTTTATTCCCCAAGGAGATGCTATCTTCATGAAGTGGGTGCTAACAACATGGACTGATGAAGAATGCAAGCACATAATGCAGAACTGTCACAAGGCACTCCCTGAGGGAGGAAAACTAATAGCATGTGAGCCAGTGCTCCCGGAGGACTCAGACGAGAGTCACAGAACGAGGGCATTGCTTGAAGGTGACATTTTTGTGATGACAATCTACAGAGCCAAAGGGAAGCACAGGACTGAAGAACAGTTCAGGCAATTAGCCATTGATGCAGGCTTCCCTCGTTTCAGAGCCTTCCATGTTGACCATTTCTACACTGTCCTTGAGTTTCAGAAATGA 1068 0.5412 MEKEESTEQRKQARLAIMELANMISVPMALNAVVRLNVADAIWQGGANNPLSAAEILPRLLPAGGGDAENLQRLLRMLASYGVFYEHLSAGERKYSLTDVGKTLVTDEQGLSYAHYVLQHHQDALMRAWPMVHEAVVDPTKEPFERANGEPAYGYYLKHPEMNDLMVRAMSGVSVPFIRAMLEGYDGFQGVEKLVDVGGSGGDCLRMILEKHPTIKEGINFDLPEVVAKAPQIPFVTHVGGDMFKFIPQGDAIFMKWVLTTWTDEECKHIMQNCHKALPEGGKLIACEPVLPEDSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFRQLAIDAGFPRFRAFHVDHFYTVLEFQK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2857 355 PANTHER OS02G0823400 PROTEIN 3 354 - -
Gso11g2857 355 SUPERFAMILY "Winged helix" DNA-binding domain 9 107 IPR036390 -
Gso11g2857 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 353 IPR029063 -
Gso11g2857 355 Coils Coil 351 355 - -
Gso11g2857 355 Coils Coil 3 23 - -
Gso11g2857 355 Pfam O-methyltransferase domain 131 336 IPR001077 GO:0008171
Gso11g2857 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Gso11g2857 355 Gene3D - 1 109 IPR036388 -
Gso11g2857 355 PANTHER O-METHYLTRANSFERASE 3 354 IPR016461 GO:0008168
Gso11g2857 355 Gene3D Vaccinia Virus protein VP39 110 355 IPR029063 -
Gso11g2857 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 355 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2857 Gso-Chr11 44264251 44273158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2857 3 355 Monolignol Biosynthesis Gene Families AT3G53140 74.860 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2857 - - gmx:100784957 725.317