Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2852 ATGAAGAATTCCCTGGTTATAGCCTTTTCCATAACCATATGCTCCATCGCTTTTGTGATATCAAAGATTGTTATCTCAGTCCTCCTCTACAAAAGATGGAGAAGAAAACATTTGATTCATGAAGAAGGTTATCCAGGAGGGAAGATAGTAATATTTAGGTCCTCAGGGCTTAAATCTCTCAAAGCTGATGTGATCTTAAAGAAGACACAGAAACTAAACAGCAAGGACATCATTGGATCAGGTGGTTATGGTGTGGTTTATGAACTAAAACTAGATGACTCCACAGCCTTGGCAATAAAAAGACTAAATCGCGGAACTGCAGAGAGAGATAAAGGTTTTGAGAGAGAGTTGGAAGCAATGGCAGACATAAAGCACCGCAACATTGTGACACTTCATGGATATTACTCTGCACCACACTACAATCTTCTCATATATGAGCTAATGCCCCATGGAAGTTTGGATTCCTTTTTGCATGGGAGATCAAGGGAGAAGAAGGTTTTGGATTGGCCAACCAGATATAGAATAGCTGCAGGTGCAGCTAGAGGAATATCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGACATAAAGTCAAGTAACATATTGTTGGATCGAAATATGGATGCTCGAGTTTCTGATTTTGGATTAGCAACGTTGATGCAACCAACTAAAACTCATGTGTCAACAATTGTAGCTGGAACTTTTGGATACTTGGCACCTGAATATTTTGATACAGGAAGAGCAACACTGCAAGGGGATGTTTACAGCTTTGGAGTTGTTTTGCTGGAGCTTTTAACTGGGAAAAAACCCAGTGATGAAGCATTTATGGAAGAGGGAACCATGCTTGTCACATGGATCAAGTGA 873 0.4021 MKNSLVIAFSITICSIAFVISKIVISVLLYKRWRRKHLIHEEGYPGGKIVIFRSSGLKSLKADVILKKTQKLNSKDIIGSGGYGVVYELKLDDSTALAIKRLNRGTAERDKGFERELEAMADIKHRNIVTLHGYYSAPHYNLLIYELMPHGSLDSFLHGRSREKKVLDWPTRYRIAAGAARGISYLHHDCIPHIIHRDIKSSNILLDRNMDARVSDFGLATLMQPTKTHVSTIVAGTFGYLAPEYFDTGRATLQGDVYSFGVVLLELLTGKKPSDEAFMEEGTMLVTWIK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2852 290 Gene3D Phosphorylase Kinase; domain 1 41 147 - -
Gso11g2852 290 SMART serkin_6 72 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2852 290 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Gso11g2852 290 PANTHER BNAA07G39120D PROTEIN 1 289 - -
Gso11g2852 290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Gso11g2852 290 Pfam Protein kinase domain 74 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2852 290 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 289 - -
Gso11g2852 290 SUPERFAMILY Protein kinase-like (PK-like) 54 279 IPR011009 -
Gso11g2852 290 ProSiteProfiles Protein kinase domain profile. 72 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2852 290 Gene3D Transferase(Phosphotransferase) domain 1 148 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2852 Gso-Chr11 44216083 44221235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2852 5 290 Receptor kinase-like Gene Family AT2G35620 48.789 4.12e-88 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Gso11g2852 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2852 - - gmx:100305410 543.117