Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2848 ATGGAAGCAGCGTGGATCACAATTCTGGTACTGATATTCATCCTCTCTCTGATAGGCGCATGGAAGTTGCTGAACTGGTTATGGCTCACACCCAAGAGACTAGAAAGGCTTCTGAGAGAGCAAGGCCTTCAAGGCAATCCATACACGCTTCTTGTTGGGGACTCCATGGAGGTTATCAAGATCAGAAAGGAAGCCTTATCCAAACCTATCACTCTCTTCTCTCATGACATAGTGCCGCGTGTCTCTTCCTATGCTCAACACACTCTCAACAAACATGGCAAAAATTCTTTTATCTGGTTTGGACCAATACCAAGGGTGACCCTCACAGATCCTGAGCTAATCAAAGAAGTACTCAACAAGATTTATGACTTTGGAAAGCTTAAATTGAATCCGCATGTCAAATTACTAGTTCCTGGTCTTGCAAGGCTGGAGAGAGAAAAGTGGAGCAAGCACAGAAAGATAATCAACCCCGCATTCAATTTAGACAAGTTGAAGAATATGTTACCACTATTCATCAAATGTTGCGATGATCTGATTAGTAAATGGGAGGGAATGTTGGCTTCAGATGGATCAAGTGAAATCAACGTATGGCCTTTCCTTCAGAATTTGGCTAGTGATGCTATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATATTTCAACTTCTAAAAGAGCAAACTGAACTTACAATGAAAATTATACTCAAAGTTTATATCCCTGGATGGAGGTTTGTACCTACTACTACTCATAGAAGGATTAAGGAAATAGATAGAGTTATAAAAGCTTTGCTTATGGATATGATTAACAAGAGAGAGAAAGCGCTAAAGGCGGATGAAGCCACTAAAAACAACTTGTTAGATATACTTCTGGAGTCAAATCACAAGGAAATTCAAGAACACAAAAATAATAAGAATGTTGGATTGAATCTTGAGGAAGTTATTCAGGAATGCAAGCTATTTTACTTTGCAGGGCAGGAGACCACTTCAGTTTTGCTTGTTTGGACAATGATATTATTGAGTAGGTACCCTGATTGGCAAACACGCGCAAGGGAGGAAGTCTTAAAGGTTTTTGGAAACCAAAAACCAAATTTTGATGGACTAAGTCACCTTAAGATTGTTACCATGATTTTGTACGAGGTTCTTAGGTTATACCCACCGGCAATTGGTCTTGTTCGAAAAGTTAACAAAGATGTGAAACTTGGAAACCTATCATTACCTGCTGGAGTGCAGATTTCCTTGCCAATAGTTTTGGTTCACCATGATTGTGAGCTTTGGGGCGATGATGCTAAAGAGTTCAAACCGGAGAGATTTTCTGAAGGACTTCTAAAGGCCACAAATGGAAGGTTTTCATTTTTTGCCTTTGGAGGGGGTCCTAGAATATGCATCGGACAAAACTTTTCCTTTTTGGAAGCAAAGATTGCTTTGTCGATGATTCTACAACGTTTCTTGTTTGAACTTTCTCCAACCTATACTCATGCTCCAACTACCGTTATTACTCTTCAGCCCCAATATGGTGCTCATCTCATTCTAAGAAAGGTGGAAATATAA 1560 0.3962 MEAAWITILVLIFILSLIGAWKLLNWLWLTPKRLERLLREQGLQGNPYTLLVGDSMEVIKIRKEALSKPITLFSHDIVPRVSSYAQHTLNKHGKNSFIWFGPIPRVTLTDPELIKEVLNKIYDFGKLKLNPHVKLLVPGLARLEREKWSKHRKIINPAFNLDKLKNMLPLFIKCCDDLISKWEGMLASDGSSEINVWPFLQNLASDAISRTAFGSSYEEGRRIFQLLKEQTELTMKIILKVYIPGWRFVPTTTHRRIKEIDRVIKALLMDMINKREKALKADEATKNNLLDILLESNHKEIQEHKNNKNVGLNLEEVIQECKLFYFAGQETTSVLLVWTMILLSRYPDWQTRAREEVLKVFGNQKPNFDGLSHLKIVTMILYEVLRLYPPAIGLVRKVNKDVKLGNLSLPAGVQISLPIVLVHHDCELWGDDAKEFKPERFSEGLLKATNGRFSFFAFGGGPRICIGQNFSFLEAKIALSMILQRFLFELSPTYTHAPTTVITLQPQYGAHLILRKVEI* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2848 519 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 PANTHER CYTOCHROME P450 72A11-RELATED 27 508 - -
Gso11g2848 519 SUPERFAMILY Cytochrome P450 78 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 Pfam Cytochrome P450 86 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 508 - -
Gso11g2848 519 Gene3D Cytochrome P450 74 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Gso11g2848 519 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso11g2848 519 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2848 Gso-Chr11 44195965 44199733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2848 20 517 Cytochrome P450 AT3G14610 55.600 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2848 - K23809 gmx:100782998 1030.01