Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2836 ATGGATACTATTGTCTCAGTTGCTTCTCCAATTGTTGAAAGCCAATTTGGTTACCTAATGTCCTACAAAGAGAACCTTCAAAGGCTTGAAAACATGGCTCAAAGGCTGGAGGATACTAAAGTAAGTATGCAACACCGTGTTGATGAGGCTGAAGGGAATGAAGAAAAGATTGAAGATATTGTACAGAACTGGCTGAAGGAAGCAAGTGACACTGTTGCTGAGGCAAAGAAACTTATTGACACTGAAGGGCATGCAGAAGCAGGATGTTGTATGGGACTAATTCCCAATGTGTGGACAAGATGCCAGCTGAGCAAGGGATTTAGAGAAATGACACAAAAGATTTCAGAAGTCATAGGAAATGGAAAATTTGATAGAATTTCTTACCGTGTTCCTGCTGAAGTCACGCGTACGTCATCTGATATAGGTTACGAAGCACTGGACTCCAGAACATCAGTGCTGAATGAGATTAAGGAAGCATTGAAGGATCCTAAAATGTACATGATTGGGGTGCATGGGATGGGTGGCGTGGGTAAAACTACACTTGTGAATGAGTTAGAGTGGCAAGTAAAGAAAGATGGCTCATTTGGTGCTGTGGTTATTGCCACTATAACCTCTTCTCCAAATGTGAAAGAAATTCAAAACAAAATTGCTGATGCGTTGAATAAAAAATTGAAAAAAGAGACCGAGAAAGAAAGAGCAGGAGAATTGTGCCAAAGAATAAGAGAGAAGAAAAATGTTCTAATTATTCTAGATGACATTTGGAGTGAACTTGATTTGACAGAAGTGGGAATTCCTTTTGGTGATGAACACAGTGGCTACAAATTAGTGATGACTTCTAGAGATCTTAATGTGCTGATAAAGATGGGAACTCAAATAGAATTTGATCTCAGAGCTTTACAGGAGGAGGATAGTTGGAATTTGTTCCAGAAAATGGCAGGTGATGTTGTCAAAGAAATCAATATAAAACCAATTGCAGAAAATGTGGCCAAATGTTGTGCTGGTTTACCCCTTTTGATAGTTACTGTGGCTAAGGGTTTGAGAAAAAAGGATGCCACTGCTTGGAAGGATGCCCTAATTCAACTAGAGAGTTTTGATCATAAAGAGTTGCAAAATAAAGTCCATCCTAGTCTGGAGTTGAGTTATAATTTTTTAGAGAACGAGGAACTGAAGTCACTATTCTTATTCATTGGTTCATTTGGCATAAATGAGATCGACACAGAAGAGTTGTTTTCATATTGTTGGGGGTTGGGCTTTTACGGTCACCTGCGCACATTGACAAAGGCAAGAAACAGGTATTACAAGTTAATAAATGACCTTAGGGCCTCTTCATTGTTGCTTGAAGACCCTGAATGCATTCGAATGCATGATGTTGTGTGTGACGTGGCTAAATCAATTGCATCTAGGTTTCTTCCGACTTATGTGGTTCCAAGGTACAGAATAATAAAAGATTGGCCCAAGGTAGATCAACTTCAAAAGTGTCACTATATTATCATTCCTTGGTCTTATATTTATGAACTTCCCGAGAAGTTGGAGTGTCCAGAGTTGAAGCTACTTGTACTTGAAAATAGACATGGTAAATTGAAAGTCCCTGACAACTTTTTCTATGGGATAAGAGAAGTGAGGACTTTGAGTTTATATGGAATGTCATTCAACCCTTTCCTACCTCCTCTCTATCACTTGATAAACCTTCGCACATTGAATCTTTGTGGATGTGAATTAGGAGACATAAGGATGGTTGCAAAACTCACAAATTTAGAAATTCTCCAGTTGGGAAGTTCTAGTATTGAAGAGCTCCCTAAAGAAATAGGACATCTAACTCATCTCCGGTTGCTAAATTTAGCAACATGCTCTAAACTAAGAGTCATTCCTGCAAATCTTATATCAAGTTTGACGTGCTTAGAAGAATTGTACATGGGGAGTTGCCCTATCGAATGGGAGGTTGAAGGAAGAAAAAGTGAAAGCAACAATGCAAGTTTAGGTGAGTTATGGAATTTGAATCAGTTGACAACTTTAGAGATATCAATCCAAGATACTTCTGTTTTGCCAAAGGACTTGGAGTTCCTTGAAAAGCTCGAACGATACTACATATCAGTTGGTTATATGTGGGTAAGGCTACGGTCGGGTGGTGATCATGAAACTTCAAGAATACTTAAGCTCACAGACTCTTTGTGGACAAACATATCATTGACTACAGTTGAGGACTTGTCCTTTGCTAATTTAAAGGATGTTAAGGATGTGTATCAATTGAATGATGGTTTTCCACTACTAAAACATCTGCATATCCAAGAAAGTGATGAATTGTTGCACATCATTAACTCAACAGAGATGTCGACTCCCTATTCTGCATTTCCTAATTTGGAGACTCTGGTTCTTTTCAATCTATCTAATATGAAAGAAATATGCTATGGTCCAGTTCCAGCACATTCTTTTGAAAAACTTCAAGTTATTACGGTTGTAGATTGTGATGAGATGAAGAATCTACTTTTGTATTCTCTCTTAAAGAACCTTTCTCAACTTCGTGAGATGCAAATTACTCGATGCAAAAATATGAAAGAGATCATAGCAGTGGAAAATCAAGAGGATGAGAAAGAAGTTTCCGAGATTGTTTTCTGTGAATTGCATTCTGTCAAATTAAGACAATTACCTATGCTCCTGAGTTTCTGTTTGCCATTAACAGTCGAGAAAGACAATCAACCCATTCCTCTGCAGGCACTGTTTAATAAAAAGGTTGTGATGCCTAAACTTGAAACATTAGAGTTGCGTTACATCAATACATGTAAAATATGGGATGATATACTTCCAGTCTATTCCTGCATTCAAAACTTGACCAGCTTGTCAGTTTACAGCTGTCATAGATTAACAAGTTTGTTCTCATCCTCTGTGACTAGAGCACTGGTCAGACTAGAAAGACTAGTGATTGTTAATTGCTCTATGCTGAAGGACATATTTGTCCAAGAAGAAGAAGAGGTTGGACTTCCAAACTTGGAGGAGTTGGTTATCAAGAGTATGTGTGATTTGAAGTCAATATGGCCTAATCAACTGGCTCCAAATTCCTTTTCCAAGCTGAAAAGAATTATCTTTGAGGACTGTGAAGGCTTTGATTATGTCTTTCCAATCTCTGTGGCTAAGAAGCTTCGGCAGCTCCAATCTCTTGATATGAAGCGCTGTGTCATAAAGAATATTGTTGAAGAAAGTGATAGTTCTGATATGACGAATATTTACCTTGCACGGTTATCAGTAGATGGCTGTGATAATATGAATACCATAGTCCAGCCCTCCGTGCTATTTCCGAATTTAGATGAATTGGATGTAGGTAGTTGTCATGGAGTGGTAAATATTATAACGCCATCAAGGGCCGAAAGTTTACCAAAACTCCGCTTTTTAAGCATAGGTTGTTGTGATAAGCTAGAGGAAATTTATGGAAGCAAGAATGAGAATGATGCACCATTACGTGAAATTTATTTTATGAAATTGGAGGTATTATTATTGATGGTGTTACCGAGGCTCACAAGCTTTTGCCGGGGAAATTACAACTTCTATTTTCAATCACTACGAATGGTACAGTTGGATGCCTGTTCCATGATGGAGACTTTCTGTCATGGAAAATTAACCACACCAAGGCTCAAGAAGGTGCTATATGAATGGGGATCAAAAGAACTTTGGGATGACGACCTTAATACTACCACTAGAACAATTTTCACTAAAAGTTTCCACAATACAGAACAAGATTGGAATTCATCATCAGAACTCTGGAGGAATTAA 3762 0.3817 MDTIVSVASPIVESQFGYLMSYKENLQRLENMAQRLEDTKVSMQHRVDEAEGNEEKIEDIVQNWLKEASDTVAEAKKLIDTEGHAEAGCCMGLIPNVWTRCQLSKGFREMTQKISEVIGNGKFDRISYRVPAEVTRTSSDIGYEALDSRTSVLNEIKEALKDPKMYMIGVHGMGGVGKTTLVNELEWQVKKDGSFGAVVIATITSSPNVKEIQNKIADALNKKLKKETEKERAGELCQRIREKKNVLIILDDIWSELDLTEVGIPFGDEHSGYKLVMTSRDLNVLIKMGTQIEFDLRALQEEDSWNLFQKMAGDVVKEINIKPIAENVAKCCAGLPLLIVTVAKGLRKKDATAWKDALIQLESFDHKELQNKVHPSLELSYNFLENEELKSLFLFIGSFGINEIDTEELFSYCWGLGFYGHLRTLTKARNRYYKLINDLRASSLLLEDPECIRMHDVVCDVAKSIASRFLPTYVVPRYRIIKDWPKVDQLQKCHYIIIPWSYIYELPEKLECPELKLLVLENRHGKLKVPDNFFYGIREVRTLSLYGMSFNPFLPPLYHLINLRTLNLCGCELGDIRMVAKLTNLEILQLGSSSIEELPKEIGHLTHLRLLNLATCSKLRVIPANLISSLTCLEELYMGSCPIEWEVEGRKSESNNASLGELWNLNQLTTLEISIQDTSVLPKDLEFLEKLERYYISVGYMWVRLRSGGDHETSRILKLTDSLWTNISLTTVEDLSFANLKDVKDVYQLNDGFPLLKHLHIQESDELLHIINSTEMSTPYSAFPNLETLVLFNLSNMKEICYGPVPAHSFEKLQVITVVDCDEMKNLLLYSLLKNLSQLREMQITRCKNMKEIIAVENQEDEKEVSEIVFCELHSVKLRQLPMLLSFCLPLTVEKDNQPIPLQALFNKKVVMPKLETLELRYINTCKIWDDILPVYSCIQNLTSLSVYSCHRLTSLFSSSVTRALVRLERLVIVNCSMLKDIFVQEEEEVGLPNLEELVIKSMCDLKSIWPNQLAPNSFSKLKRIIFEDCEGFDYVFPISVAKKLRQLQSLDMKRCVIKNIVEESDSSDMTNIYLARLSVDGCDNMNTIVQPSVLFPNLDELDVGSCHGVVNIITPSRAESLPKLRFLSIGCCDKLEEIYGSKNENDAPLREIYFMKLEVLLLMVLPRLTSFCRGNYNFYFQSLRMVQLDACSMMETFCHGKLTTPRLKKVLYEWGSKELWDDDLNTTTRTIFTKSFHNTEQDWNSSSELWRN* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2836 1253 Gene3D - 298 385 IPR042197 -
Gso11g2836 1253 Gene3D Ribonuclease Inhibitor 1035 1152 IPR032675 -
Gso11g2836 1253 Gene3D Ribonuclease Inhibitor 649 868 IPR032675 -
Gso11g2836 1253 PANTHER PHOSPHATASE, PUTATIVE-RELATED 1109 1216 - -
Gso11g2836 1253 PANTHER PHOSPHATASE, PUTATIVE-RELATED 989 1070 - -
Gso11g2836 1253 PANTHER PHOSPHATASE, PUTATIVE-RELATED 13 976 - -
Gso11g2836 1253 SUPERFAMILY L domain-like 453 1142 - -
Gso11g2836 1253 Gene3D Ribonuclease Inhibitor 472 648 IPR032675 -
Gso11g2836 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 396 IPR027417 -
Gso11g2836 1253 Gene3D - 139 294 IPR027417 -
Gso11g2836 1253 SMART AAA_5 164 299 IPR003593 -
Gso11g2836 1253 Coils Coil 209 230 - -
Gso11g2836 1253 Gene3D Ribonuclease Inhibitor 897 1034 IPR032675 -
Gso11g2836 1253 PRINTS Disease resistance protein signature 167 182 - -
Gso11g2836 1253 PRINTS Disease resistance protein signature 240 254 - -
Gso11g2836 1253 PRINTS Disease resistance protein signature 332 346 - -
Gso11g2836 1253 PRINTS Disease resistance protein signature 603 619 - -
Gso11g2836 1253 PANTHER - 1109 1216 - -
Gso11g2836 1253 PANTHER - 989 1070 - -
Gso11g2836 1253 PANTHER - 13 976 - -
Gso11g2836 1253 Coils Coil 19 67 - -
Gso11g2836 1253 Pfam NB-ARC domain 152 382 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2836 Gso-Chr11 44073526 44089655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2836 168 468 WRKY Transcription Factor Family AT5G45050 27.070 1.87e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2836 - - gmx:100781555 2416.73