Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2812 ATGGATGGTCAGGGTCACGGAGGAGGGAGCAGAGCAGAAGCGGAGAGATGGCTTTACACAGCGAACAAGGTTTTAAGCGCACGTGACCTGCACGGGGCCCGCTCATTCGCGATCCGGGCCCGAGAGTCCGACCCGAGATACGAGCCCACGGAGCTCCTTCTAACGGTCATTGATACACTCATGGCCGGCGAGGCCCGGATCAACGACCACTTCGACTGGTACGCCATCCTCCAAGTCCTCCGTTATACTCAGAACATCGACTACATCACTGCCCAGTACCGCCGCCTCGCCACCCAACTCGACCCTCACCACAACCCCTTCGCTTTCGCCTCTCACGCCTTCACTCTCGTCAACGACGCGTGGTCCGTACTCTCCAACCCAACCAAAAAGGCTTTCTACGACAACCAACTCAGACTCCTCACTCAACCCGCTCCTCCTCCTCAACCACCACCGCCTCCGCCGCCGCCACCTCTCGCTTCTCCTGCCCCGGTGGCCTTCTTTCCGATTCAGCCGCCGCAACCGAACCTAAACCCGAACCAATTCCCTCAAAGGGAAAGCCCTAGGCCTAGAGTAGAGGTGGAGCCTCCACCGCCGCCGCCGAGTCAGGTGGACAATGCGACCGAATTGACTCGGGCGAGTGACGTCGAGACCGAAGGGGTGAGTTTCTGGACCGCATGCCCTTACTGTTACGTTATGTACGAGTATCCGAAGGTGTACGAGGATTGTACTTTGCGGTGCCAGAATTGTCGGAGGGGGTTTCATGGGGTGGTTGTACCGTCGCCGTCGAAAGATGGTACTTTTGGCTCATTTTGCAGTTGGGGTTTTTTCCCTGTGGGGTTTTCCGGGGATTTCAAGGACATTAACGGGTCTTCTTCCAAGTGGAACCCTTTTTCCCCTTTGTTTCCTTGCGCTTTGCAGGGGGGTGAGGAGAATGGTAGGTACCAGAAGGGGCCTTGGGTTTTTTACGATGACGACGAGTCTGCGGAGTTCGTGGAGGGTGGTTCCGACACGACGGAGGATGATTCCGATGATGATGACTGGCGTGGCGGGAATCAGAAGGGGACCACGAGGAAAAGGAAAAGAAGGAAGAAGAGTAGCAATGTTGGTGGTGGTGGTGATGTTAGAAGGGTACCTACTACAATTGAGAGGCCTAGAAGAGGGGTTCAGAATAGTGATGGTAATGACAATGTGGAGAATGGTGAGGCTGTGGATGGTGGTACTGGTGGTGCTATTGCGGTGGTGGTGCCGGAATCTAGCAAGAAGGCGGTGGCATTGGGTGGATCAAGGAGGAGGAGTGAGAGGAATTTGGGGAAGTTGGATTTGAATGTGGAGTTTAGCAATGAGGTGGAGGAGCCTATGTATGGCCCGGGTGAAGGGAATGTGAATGGGAATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAGGGGCTGGATGAGTTCCTTAGTAGCTTGCCTATTCTCAATGTTGTTGCTGATGATAAGGTTAAGGGTCATTAG 1500 0.5453 MDGQGHGGGSRAEAERWLYTANKVLSARDLHGARSFAIRARESDPRYEPTELLLTVIDTLMAGEARINDHFDWYAILQVLRYTQNIDYITAQYRRLATQLDPHHNPFAFASHAFTLVNDAWSVLSNPTKKAFYDNQLRLLTQPAPPPQPPPPPPPPPLASPAPVAFFPIQPPQPNLNPNQFPQRESPRPRVEVEPPPPPPSQVDNATELTRASDVETEGVSFWTACPYCYVMYEYPKVYEDCTLRCQNCRRGFHGVVVPSPSKDGTFGSFCSWGFFPVGFSGDFKDINGSSSKWNPFSPLFPCALQGGEENGRYQKGPWVFYDDDESAEFVEGGSDTTEDDSDDDDWRGGNQKGTTRKRKRRKKSSNVGGGGDVRRVPTTIERPRRGVQNSDGNDNVENGEAVDGGTGGAIAVVVPESSKKAVALGGSRRRSERNLGKLDLNVEFSNEVEEPMYGPGEGNVNGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2812 499 ProSiteProfiles dnaJ domain profile. 72 137 IPR001623 -
Gso11g2812 499 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Gso11g2812 499 MobiDBLite consensus disorder prediction 330 405 - -
Gso11g2812 499 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 499 - -
Gso11g2812 499 MobiDBLite consensus disorder prediction 140 206 - -
Gso11g2812 499 CDD DnaJ 72 126 IPR001623 -
Gso11g2812 499 Pfam DnaJ domain 72 134 IPR001623 -
Gso11g2812 499 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 7 499 - -
Gso11g2812 499 MobiDBLite consensus disorder prediction 142 178 - -
Gso11g2812 499 Gene3D DnaJ domain 67 142 IPR036869 -
Gso11g2812 499 SUPERFAMILY Chaperone J-domain 66 138 IPR036869 -
Gso11g2812 499 SMART dnaj_3 71 129 IPR001623 -
Gso11g2812 499 MobiDBLite consensus disorder prediction 330 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2812 Gso-Chr11 43857642 43859527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2812 13 498 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.300 3.84e-102 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2812 - - gmx:100818960 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0495 15 4445561 4447532 Gso11g2812 11 43857642 43859527 GST
Gso7g1538 7 37178631 37181956 Gso11g2812 11 43857642 43859527 PCT
Gso8g0571 8 5268836 5271902 Gso11g2812 11 43857642 43859527 PCT
Gso11g2812 11 43857642 43859527 Gso7g1538 7 37178631 37181956 PCT
Gso11g2812 11 43857642 43859527 Gso8g0571 8 5268836 5271902 PCT