Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2797 ATGGCTACTTCCCATGTTGGTCTCCATGCAACCAGCCACCTATTCTGTTATGCAAGGGGAATCGTTTTCTTTCTTATGATTACTTTTGTAAACCCACTTTCATTTCATTACCAAGGGTTTGAGTATAATGATGCCAGGATTGAAGGTGATGCTACTTTGTCACATTCAGAAATTCAACTTACTGCAACCACAAGGTACCAAAGCAATGCTTACAGTGTTGGGAGAGTCACAAGTTTTAAGTTATTGCAACTGTGGGACATGAGCTCAGGAAAACTCACCGACTTCACTACCGAATTTTCATTTGTCATTTACTCAAACGAGACTAGTTTTGGAGATGGCTTCGCTTTTTTCTTTGCAGATCCAAAGCTTCCACTTTCAAATCAAATACAACAAGGAGGTGGTCTTGGTCTTGTGGATGGTAACCGATTATTAAAGCCAACTAAATATCCATTTGTAGCAGTGGAGTTTGACACACACCAAAATTCCTGGGATCCACCTGGCACTCATGTAGGTATAAATTTCAACTCTATGAGATCTAACATAACTGTTCCATGGTCCATTGATATTAGGCAAATGAAAGTTTATTATTGTGCAATTGAGTACAATGCAAGTACACATAATTTAAATGTTTCTTTCACTGGAAACCAAATCAATGGCAAGCCAATAAAAAGTTATATCTCATGCAATGTTAATTTGAGAGATTACCTACCAGAGAGGGTTATTTTTGGCTTCTCAGCTGCTACAGGATTTATGTTTGAGATGAACACATTGTTGTCATGGTCATTCCGTTCAAGTTTACCAAGTGATGAGAAGGTGTCAAATCAAATACCTCCAATGGCAGCCCCACCAATCCAAAATCCTTCTCCTTCACCATTTCCCACTGCTAATATTAGCCCTAAACAAGAGGGCAACAAAGGTTTATTGAAGGGGATAGAAGCAGGTATAGGTATAGCTGCAAGTTTCCTTATTTTAGGGTTGGTTTGTATTTTTATTTGGAAGAGGGCTAAATTGAAAAAAGAAGATTCAGTTTTTGATCTGAGCATGGATGATGAATTCCAAAAGGGCATTGGACCCAAAAGATTTTGCTATAAAGAATTGGCAAGTGCAACAAATAACTTTGCAGAGGCCCAAAAGATTGGACAAGGTGGTTTTGGTGGTGTTTATAAAGGCTATTTGAAAAAGCTAAACTCCAATGTTGCTATAAAGAGGATATCAAGAGAATCTAGGCAAGGTATAAAGGAATATGCAGCTGAAGTTAAGATCATCAGCCAACTGAGGCATAGGAATTTAGTACAACTAATTGGTTGGTGCCACATGAAGAAAGATCTCCTCCTTATATATGAGTTCATGCAAAATGGTAGCTTAGATTCCCACCTATATCGTGGAAAAAGCATCTTGACATGGCAGATGAGGTACAACATTGCTATGGACTTGGCTTTGGCAGTGTTGTACCTTCATGAAGAATGGGAGCAGTGTGTTCTTCATAGGGACATTAAATCCAGCAATGTTATGTTAGACTTAAGTTTCAATGCTAAGCTTGGGGATTTTGGCTTAGCTAGGCTGGTTGACCATGAGAAAGGATCACAAACCACAATTTTAGCAGGTACCGTGGGCTACATAGCCCCTGAATATTGCACTACAGGGAAGGCTAGGAAGGAATCTGATATATACAGTTTTGGGGTTGTTTTGTTGGAGTTAGCCAGTGGAAGAAAACCAATTGACCTTAATGCCAAGGAAGGTCAAATAACCATATTTGAGTGGGTTTGGGAGCTCTATAGATTGGGAAAGTTACTTGAAGTAGTAGACTCAAAGCTTGGGGGAGCATTTGATGAGGAGCAAATGGAACATTTAGTGATTGTTGGCCTTTGGTGTGCCAATCCAGATTATACTTCCAGGCCATCTGTAAGGCAAGTGATTCAAGTGCTTACGTTTGAAGCTCCTTTACCAGTTCTCCCACAGAAAATGCCTGAGCCATATCACCATTCTCCAACAATGAGTACTATTTTTGCTTCAGTTTCTTCTCTCTCTCTGGCTACATGTTAG 2043 0.3955 MATSHVGLHATSHLFCYARGIVFFLMITFVNPLSFHYQGFEYNDARIEGDATLSHSEIQLTATTRYQSNAYSVGRVTSFKLLQLWDMSSGKLTDFTTEFSFVIYSNETSFGDGFAFFFADPKLPLSNQIQQGGGLGLVDGNRLLKPTKYPFVAVEFDTHQNSWDPPGTHVGINFNSMRSNITVPWSIDIRQMKVYYCAIEYNASTHNLNVSFTGNQINGKPIKSYISCNVNLRDYLPERVIFGFSAATGFMFEMNTLLSWSFRSSLPSDEKVSNQIPPMAAPPIQNPSPSPFPTANISPKQEGNKGLLKGIEAGIGIAASFLILGLVCIFIWKRAKLKKEDSVFDLSMDDEFQKGIGPKRFCYKELASATNNFAEAQKIGQGGFGGVYKGYLKKLNSNVAIKRISRESRQGIKEYAAEVKIISQLRHRNLVQLIGWCHMKKDLLLIYEFMQNGSLDSHLYRGKSILTWQMRYNIAMDLALAVLYLHEEWEQCVLHRDIKSSNVMLDLSFNAKLGDFGLARLVDHEKGSQTTILAGTVGYIAPEYCTTGKARKESDIYSFGVVLLELASGRKPIDLNAKEGQITIFEWVWELYRLGKLLEVVDSKLGGAFDEEQMEHLVIVGLWCANPDYTSRPSVRQVIQVLTFEAPLPVLPQKMPEPYHHSPTMSTIFASVSSLSLATC* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2797 680 Pfam Protein kinase domain 374 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2797 680 ProSitePatterns Protein kinases ATP-binding region signature. 379 402 IPR017441 GO:0005524
Gso11g2797 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Gso11g2797 680 ProSiteProfiles Protein kinase domain profile. 373 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2797 680 ProSitePatterns Legume lectins alpha-chain signature. 236 245 IPR000985 -
Gso11g2797 680 Gene3D Phosphorylase Kinase; domain 1 358 449 - -
Gso11g2797 680 CDD lectin_legume_LecRK_Arcelin_ConA 33 266 IPR001220 GO:0030246
Gso11g2797 680 Pfam Legume lectin domain 33 271 IPR001220 GO:0030246
Gso11g2797 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 270 IPR013320 -
Gso11g2797 680 SMART serkin_6 373 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2797 680 PANTHER LECTIN RECEPTOR KINASE 20 678 - -
Gso11g2797 680 Gene3D Transferase(Phosphotransferase) domain 1 450 661 - -
Gso11g2797 680 SUPERFAMILY Protein kinase-like (PK-like) 357 667 IPR011009 -
Gso11g2797 680 Gene3D - 31 277 - -
Gso11g2797 680 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Gso11g2797 680 PANTHER - 20 678 - -
Gso11g2797 680 CDD STKc_IRAK 379 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2797 Gso-Chr11 43734036 43736476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2797 23 661 Receptor kinase-like Gene Family AT5G10530 44.939 1.65e-178 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso11g2797 Pkinase 7.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2797 - - gmx:100814713 1342.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0554 8 5122412 5124944 Gso11g2797 11 43734036 43736476 PCT
Gso11g2797 11 43734036 43736476 Gso7g1560 7 37364254 37369399 PCT
Gso11g2797 11 43734036 43736476 Gso8g0551 8 5106226 5108597 PCT