Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2764 ATGGTCTACTATGCCCCTTGGACAGAATTCAAAAAGAGGAGGAGTAACGCTATTCATCCCTTAATGAAGAAGCAGAACCATCAAAAGAACACTAGACAAGAAGCTGAATTGCTACCACTAGCCATGCAAGAGCAAGGAAGCAAAGAGCTATCAAGATTGTTGGAGAGATTGATTCCTAGAATGAGCTTCAAGGAATTATGCAAGGCAACCGATTACTTTAGCACAGATAACGTTTTAGGGATAGGAACGACAGGGATTATGTACAAGGCAAAGGTACCAAATAACTGTTTTCTAGCAGTTAAGAGACTATATGGCGCTGATGAATACAAGAGGGAATTCTTGCTTGAAACAATGATTCTGGGGAGACACAGGCACAGAAACATAGCTCCATTGGTAGGATTCTGCATAGAAAAAAGAGAAAGGATTTTGGTGTATAAGTACATGTCTAATGGAAGACTCAGTGATTGGTTCCATTCTGATGAAGGAGATCAAAAAATAAAACTAGAATGGCCAGAGAGAATTCACATTGCACTTGGGATTGCAAGAGGTTTATCTTGGCTCCACAAAAGGTGCAAGATATTCCATCTTAATTTAGATTCAGAGTGTGTCTTGCTAGACAGGTATTTTGAGCCAAAAATATCCAATTTTGAGAAGGCAAAATTTCTAAACCATACAGTTGAAGATCATGTGAGGATGAATGTTATGAATTAG 711 0.3868 MVYYAPWTEFKKRRSNAIHPLMKKQNHQKNTRQEAELLPLAMQEQGSKELSRLLERLIPRMSFKELCKATDYFSTDNVLGIGTTGIMYKAKVPNNCFLAVKRLYGADEYKREFLLETMILGRHRHRNIAPLVGFCIEKRERILVYKYMSNGRLSDWFHSDEGDQKIKLEWPERIHIALGIARGLSWLHKRCKIFHLNLDSECVLLDRYFEPKISNFEKAKFLNHTVEDHVRMNVMN* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2764 236 PANTHER RECEPTOR-LIKE PROTEIN 55 22 227 - -
Gso11g2764 236 Gene3D Transferase(Phosphotransferase) domain 1 148 235 - -
Gso11g2764 236 SMART tyrkin_6 73 236 IPR020635 GO:0004713|GO:0006468
Gso11g2764 236 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 22 227 - -
Gso11g2764 236 SUPERFAMILY Protein kinase-like (PK-like) 52 229 IPR011009 -
Gso11g2764 236 Pfam Protein kinase domain 74 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2764 236 ProSiteProfiles Protein kinase domain profile. 73 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2764 236 Gene3D Phosphorylase Kinase; domain 1 33 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2764 Gso-Chr11 43478172 43479090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2764 60 234 Receptor kinase-like Gene Family AT5G45780 41.573 2.68e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gso11g2764 Pkinase 5.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2764 - - gsj:114373320 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0528 8 4869610 4872304 Gso11g2764 11 43478172 43479090 PCT
Gso11g2764 11 43478172 43479090 Gso8g0528 8 4869610 4872304 PCT