Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2756 ATGGCACAGAAGCAAAAGCTGCGCCCTTCTCCTCTCGACGAGCCACCCACTGCTTCCTCTTCCGATTCCGAGGAAGAAGAGCCACAACAACAACAACCATCCTCCCAGAAGAACAAAGAAGAGGAAGACGAAGAAGTTTCCTCCGGAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGCTGCTTCCTCCGAAGAAGAGGAAGAAGACGAAGATCTCCCACCACCACCAGTTTCCAAAAACCCTCCACCCCCTCCCGCAAACCCTCAGCCCCAACACTCTTCCTCCGAATCCGAAACCGAATCAGGATCCGAGACCGAATCCGAACCTGACCCCACTCCCGTCAAGGTCAAGCCTTTAGCTTCCAAGCCCATGGACCAGGCCCAAAAGCCCAAGGCCCAGCCCTCCCCGGCGCCACCCCCAAAATTGACACTCAAGCGCCCCGCCGAGAACAACAACAACAACGCCCGCGTCGCCGACTCCAAACGCGCCAAGAAGAAAGCCACCGAATCTTCTTCTGCCGCCAACTCCGCCGCGGCCGCTGCTTCTGACGACGAGATGGAGGAGGACGGGAAGAAGTCCGGCGATAACTCGAAGAAGTTTCAGAGACTGTGGAGCGAGGAGGACGAGCTCGCCATTGTGAAGGGCGTGGTTGAGTTCACTTCGAAAACAGGGCTGGACCCTCTTAAGTTTCCCAATACCAACGCTTTTCACGATTTCGTGAAGAAGTCGCTTCACGTGGAAGTTTCCTGCAACCAGCTGAAGGAGAAGGTCCGAAGGCTCAAGAAGAAGTTTGAGACCCAGGCTGGAAAAGGGAAGAACGGAGAGGCCCCTAAGTTTTCCAAACCGCACGATCAGAAATTCTTTGAATTGTCCAAAAAGGTTTGGGGACGTGAGGTTACTGCTGGAGCTAATGGGGGCCCCGTGGAGAAGCCCAAGTCTAATGGGAGTGCTGTCAAGAGTCCGAAGAAGAAGGAAAGCGGTAGCAGGAATGTGGCTTCTGCTAAGAAACCGAAGCCTGAATCAAAACCGGAGCCGGTTCCAGTGCTGTCCTTGGAGTATAAGGATTCTGAAAAGATGCAGATTAATCAAAAGCCTGATGGTGGTGATGCAAGTTTGTTTTTGCGCGAATTGGCTCGATCCAAAGAGGGTGCGAGTATTTGTAAGCTGGATGAGGATGATGTGAAGAGGGGGTTGGAGTTGATTGGAGAGTCAAAGAGGGCAGAGTTGAGGGGGAAGTGGAAGAAATTACATCTTGCTGAGATGGAACTGTTTGCGAATCGCTCAGAACTGATAGGGGAGCAGACTAAGTTGATACTTGAGGCGCTTCAGGCATCCGATCATTAG 1347 0.5249 MAQKQKLRPSPLDEPPTASSSDSEEEEPQQQQPSSQKNKEEEDEEVSSGEEEEEDEEEEEAASSEEEEEDEDLPPPPVSKNPPPPPANPQPQHSSSESETESGSETESEPDPTPVKVKPLASKPMDQAQKPKAQPSPAPPPKLTLKRPAENNNNNARVADSKRAKKKATESSSAANSAAAAASDDEMEEDGKKSGDNSKKFQRLWSEEDELAIVKGVVEFTSKTGLDPLKFPNTNAFHDFVKKSLHVEVSCNQLKEKVRRLKKKFETQAGKGKNGEAPKFSKPHDQKFFELSKKVWGREVTAGANGGPVEKPKSNGSAVKSPKKKESGSRNVASAKKPKPESKPEPVPVLSLEYKDSEKMQINQKPDGGDASLFLRELARSKEGASICKLDEDDVKRGLELIGESKRAELRGKWKKLHLAEMELFANRSELIGEQTKLILEALQASDH* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2756 448 MobiDBLite consensus disorder prediction 185 201 - -
Gso11g2756 448 MobiDBLite consensus disorder prediction 317 343 - -
Gso11g2756 448 Pfam Protein of unknown function, DUF573 201 297 IPR007592 GO:0006355
Gso11g2756 448 Coils Coil 251 271 - -
Gso11g2756 448 MobiDBLite consensus disorder prediction 44 73 - -
Gso11g2756 448 MobiDBLite consensus disorder prediction 265 285 - -
Gso11g2756 448 PANTHER BNAANNG10740D PROTEIN-RELATED 11 447 IPR007592 GO:0006355
Gso11g2756 448 Coils Coil 39 69 - -
Gso11g2756 448 MobiDBLite consensus disorder prediction 300 351 - -
Gso11g2756 448 MobiDBLite consensus disorder prediction 14 35 - -
Gso11g2756 448 MobiDBLite consensus disorder prediction 1 201 - -
Gso11g2756 448 MobiDBLite consensus disorder prediction 76 91 - -
Gso11g2756 448 PANTHER STOREKEEPER PROTEIN-LIKE 11 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2756 Gso-Chr11 43427468 43429125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2756 188 443 GeBP Transcription Factor Family AT1G11510 34.483 1.01e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gso11g2756 DUF573 8.3e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2756 - - gmx:100807745 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0543 15 4841672 4843361 Gso11g2756 11 43427468 43429125 GST