Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2743 ATGGCTGAGGATTTTCAAGCTGCTATCTGTGGTGAAAATTGGTGGAATAATATTAATCCAACAAGAAGTGTCTTTCCTCTTATGCCATCAACTTGTTCGGTGGCAGCAGCTGATCATGCAGGAAACTACAGCACTTGGCAAAGTACTACTGATTTCGTTGATTTGAAGGGAACAAGGTCTTGTGCTGAGCTGGAGACTGATAATAACTTGAGTTTTCTTGATGCTGAGAAGCCACAGCAGAGTGAAAGTGGTAGCATCTTGATCAATTCCACCTTACAAATGATGGGTTTTGGCAAGTCATCTTCAACTTCATCGAATTGGAATCAATCTTTATTAGGGAGCGGTTTTGATTCTGTGCTTCAAGAAGAAACAGGCATAGGTGGTGGCAGCCAAGTTTCCACCGTTGATGCTTTGAAGCCAATGAACCAAGAATTTTCCTTGGATCAGCAGAGTCTGAATTCTGTTGTTACAAGCACTGGATCATTATCTGGTGGTTTCCCAGTTGTTTCAGCCTCCTATGGTTACCCTTCAACATTGATACAAAGCTTATATGAGCCTGAGCCTCAACCACAACAACAGAACTCACTTTTCACCAACCCCTCCATGTCCTACTCATCATCTTCCGCAAACTATGGGATATGTTCCAATGAACTGTCACCAACTTGGTCCAAAGTTTCTTCCCTTCCCAAACCCTCAATGCCAAAGCAACAGCTCAGTGGATTGCACTTTTCCAACAACACTGCTTTCTGGAATTCTTCAGCCGAAGCACTTAATGACATAAGAGCAGGTGTTTTTACTTCATCACAAGCCCAATATCAAACGGCAAAATTTGAAGAGAAACCCAACTGCCCCAATACTCTATTAAACAAGCTCAAGAGAGAAGAATCACCAGACGCAGCGAAGAAAAATTCTCCTGAGCCTGCATTCAAGAGGCAAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTTAGGAAAGAAAAGCTGGGGGACCGCATCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACGGATACAGCATCCGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTCCATGACCAAGTTTTGAGCACTCCATATATGAAAAACAACGGAGCTCCCATTCAACACCAGCAGGATTGTGATAATCTGAAGGACTCAGAAGGGGCAAAACAAGATTTGAGAAGCCGAGGGCTGTGTTTGGTGCCGATTTCAAGCACATTCCCAGTGGCTAATGAGACCAGTGTTGATTTCTGGACGTCTACATTTGGAGGCGCACTCATTGGCAGGTAG 1308 0.4381 MAEDFQAAICGENWWNNINPTRSVFPLMPSTCSVAAADHAGNYSTWQSTTDFVDLKGTRSCAELETDNNLSFLDAEKPQQSESGSILINSTLQMMGFGKSSSTSSNWNQSLLGSGFDSVLQEETGIGGGSQVSTVDALKPMNQEFSLDQQSLNSVVTSTGSLSGGFPVVSASYGYPSTLIQSLYEPEPQPQQQNSLFTNPSMSYSSSSANYGICSNELSPTWSKVSSLPKPSMPKQQLSGLHFSNNTAFWNSSAEALNDIRAGVFTSSQAQYQTAKFEEKPNCPNTLLNKLKREESPDAAKKNSPEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVLSTPYMKNNGAPIQHQQDCDNLKDSEGAKQDLRSRGLCLVPISSTFPVANETSVDFWTSTFGGALIGR* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2743 435 MobiDBLite consensus disorder prediction 291 318 - -
Gso11g2743 435 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 52 423 - -
Gso11g2743 435 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 314 363 IPR011598 GO:0046983
Gso11g2743 435 CDD bHLH_AtbHLH_like 320 367 IPR045239 -
Gso11g2743 435 MobiDBLite consensus disorder prediction 291 309 - -
Gso11g2743 435 PANTHER TRANSCRIPTION FACTOR BHLH123 52 423 - -
Gso11g2743 435 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 368 IPR036638 GO:0046983
Gso11g2743 435 Gene3D - 324 385 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2743 Gso-Chr11 43342889 43346014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2743 1 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 40.222 8.10e-66 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2743 - - gmx:100805087 837.025