Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2738 ATGAGGAGGAGGAGAGTGAGAATGAACAAAATTGTTATTATTTTTGCTTGTCTATCAATGCTTCAGAAAATGGCATATGCAGCTGATGCCTTGACTCCAACATCCTCCATTAATGATGGCCAAGAACTAATTTCTGCTGGACAAAATTTTTCTCTAGGATTCTTCACACCAGGAATCTCCAAAAGCCGCTACGTAGGGATATGGTACAAGAATATTATGCCTCAAACCGTGGTTTGGGTAGCAAATAGAGATTACCCACTCAATGACTCAAGTGGAAACTTAACCATTGTTGCTGGGAATATTGTACTTTTTGATGGATCAGGTAACAGGATATGGTCTACAAATTCATCAAGATCATCAATTCAAGAACCAATGGCAAAACTGCTGGATTCTGGAAATTTAGTCTTGATGGATGGAAAGAGCAGTGATTCTGATAGTTACATATGGCAAAGCTTTGATTATCCAACAGATACAACGTTACCTGGCTTGAAATTGGGTTGGGACAAGACCTCAGGTCTCAACAGATATTTGACTTCTTGGAAAAGTGCTAATGACCCTTCTGCTGGAAGCTTTACTTACGGCTTTCACCATAACGAAATTACTGAGTTTGTATTGCGCCAGGGAATGAAAATCACATTCAGAAGTGGGATTTGGGATGGCACTCGTTTAAATTCAGATGATTGGATATTTAATGAAATTACAGCCTTCAGGCCAATAATTTCAGTAACTAGCACTGAGGCACTGTATTGGGATGAACCTGGAGATAGATTGTCAAGGTTTGTGATGAAAGATGATGGAATGCTTCAAAGGTATATATGGGACAACAAAGTTCTTAAGTGGATTGAGATGTATGAGGCAAGAAAAGATTTTTGTGATGACTATGGAGCATGTGGGGTGAATGGTATTTGCAATATTAAGGATGTTCCTGTTTACTGTGATTGCTTGAAAGGCTTCAAACCCAAATCACAGGAAGAATGGAATTCATTTAATCGGTCTGGTGGGTGCATCAGGAGAACACCCTTAAACTGCACACAAGGTGATAGGTTTCAGAAATTAAGTGCGATAAAACTACCCAAGTTGTTGCAATTTTGGACTAATAATAGCATGAATCTTGAAGAATGCAAGGTGGAGTGCTTGAAGAACTGTTCTTGCACCGCATATGCAAATTCTGCCATGAATGAAGGGCCTCATGGATGCTTTCTTTGGTTTGGGGACTTGATTGACATTAGGAAGCTTATAAATGAAGAGGCTGGACAACTTGATCTTTACATAAAGTTAGCCGCTTCAGAAATAGAGTCCACTGCTAATGCTATTAAAAGGAGAAAGATAGCACTGATTATTTCAGCATCTTTGGTGGCACTGCTGCTTTTGTGTATTATTTTGTACCTTTCTAAGAAGTATATAAAAGAGAGGACCACTACTGATTTGGGTAATAGAAATCATAATGAACATCAAGCATCGCCTCTTTTTCATATAGACACTATTCTGGCTGCTACAAACAATTTTTCTACTGCAAACAAGATTGGAGAAGGTGGTTTTGGCCCAGTATACAGGGGTAAATTGGCAGATGGACAAGAAATAGCTGTGAAAAGGCTATCAAAAACCTCAAAGCAAGGCATCTCAGAGTTTATGAATGAAGTTGGATTGGTAGCCAAACTCCAACACCGTAATCTTGTGAGTATTTTGGGAGGGTGCACTCAAGGAGATGAAAGAATGTTAGTCTATGAATACATGGCAAATAGTAGCTTGGACCACTTCATTTTTGATCCTACACAAAGAAAATTTTTGAATTGGAGGAAACGGTATGAAATTATTATGGGGATTTCTCGGGGACTACTTTATCTCCATCAAGATTCAAAGTTAACCATTATTCACAGGGATCTAAAAACTAGTAACATTCTACTAGACAGCGAATTGAACCCCAAAATTTCTGATTTTGGTCTTGCCCACATCTTTGAAGGAGATCATTCTACAGTAACAACAAAAAGAATTGTTGGGACAGTTGGTTATATGTCCCCCGAGTATGCAGCAAATGGGCTTCTTTCCCTAAAGTCTGATGTATTCAGCTTTGGAGTTATAGTGTTAGAGATACTAAGTGGCATCAGAAATAATAATTTCTACCATTCAGATCATGAGCGCAATCTGTTGGTGCAGGCATGGAGATTATGGAAAGAAGGTCGAGCTGTGGAATTCATGGATGCTAATTTAGACCTTGCAACTATTCGATCAGAATTACTAAGGTGTCTGCAAGTTGGTCTCTTGTGTGTGCAAAAGTTACCAAAAGACAGACCAACTATGTCATCTGTGGTTTTCATGTTGAGCAATGAAAGCATTACACTTGCCCAACCAAAGAAGCCTGAATTCATTGAAGAAGGATTAGAGTTTCCAGGGTACAGCAACAATTCTATGACTATTACTCTATTAGAAGCTCGAAATTAG 2439 0.3879 MRRRRVRMNKIVIIFACLSMLQKMAYAADALTPTSSINDGQELISAGQNFSLGFFTPGISKSRYVGIWYKNIMPQTVVWVANRDYPLNDSSGNLTIVAGNIVLFDGSGNRIWSTNSSRSSIQEPMAKLLDSGNLVLMDGKSSDSDSYIWQSFDYPTDTTLPGLKLGWDKTSGLNRYLTSWKSANDPSAGSFTYGFHHNEITEFVLRQGMKITFRSGIWDGTRLNSDDWIFNEITAFRPIISVTSTEALYWDEPGDRLSRFVMKDDGMLQRYIWDNKVLKWIEMYEARKDFCDDYGACGVNGICNIKDVPVYCDCLKGFKPKSQEEWNSFNRSGGCIRRTPLNCTQGDRFQKLSAIKLPKLLQFWTNNSMNLEECKVECLKNCSCTAYANSAMNEGPHGCFLWFGDLIDIRKLINEEAGQLDLYIKLAASEIESTANAIKRRKIALIISASLVALLLLCIILYLSKKYIKERTTTDLGNRNHNEHQASPLFHIDTILAATNNFSTANKIGEGGFGPVYRGKLADGQEIAVKRLSKTSKQGISEFMNEVGLVAKLQHRNLVSILGGCTQGDERMLVYEYMANSSLDHFIFDPTQRKFLNWRKRYEIIMGISRGLLYLHQDSKLTIIHRDLKTSNILLDSELNPKISDFGLAHIFEGDHSTVTTKRIVGTVGYMSPEYAANGLLSLKSDVFSFGVIVLEILSGIRNNNFYHSDHERNLLVQAWRLWKEGRAVEFMDANLDLATIRSELLRCLQVGLLCVQKLPKDRPTMSSVVFMLSNESITLAQPKKPEFIEEGLEFPGYSNNSMTITLLEARN* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2738 812 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 807 - -
Gso11g2738 812 Gene3D - 23 152 IPR036426 -
Gso11g2738 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Gso11g2738 812 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Gso11g2738 812 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Gso11g2738 812 Pfam PAN-like domain 343 409 IPR003609 -
Gso11g2738 812 SMART blect_4 34 155 IPR001480 -
Gso11g2738 812 CDD STKc_IRAK 508 773 - -
Gso11g2738 812 ProSiteProfiles PAN/Apple domain profile. 343 427 IPR003609 -
Gso11g2738 812 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 12 807 - -
Gso11g2738 812 PIRSF SRK 3 811 IPR024171 GO:0004674
Gso11g2738 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 186 IPR036426 -
Gso11g2738 812 SUPERFAMILY Protein kinase-like (PK-like) 485 773 IPR011009 -
Gso11g2738 812 Pfam D-mannose binding lectin 76 181 IPR001480 -
Gso11g2738 812 SMART ntp_6 344 426 IPR003609 -
Gso11g2738 812 SMART serkin_6 502 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2738 812 Gene3D Phosphorylase Kinase; domain 1 463 577 - -
Gso11g2738 812 Gene3D Transferase(Phosphotransferase) domain 1 578 786 - -
Gso11g2738 812 ProSiteProfiles Protein kinase domain profile. 502 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2738 812 CDD PAN_AP_plant 339 427 - -
Gso11g2738 812 Pfam Protein tyrosine and serine/threonine kinase 504 771 IPR001245 GO:0004672|GO:0006468
Gso11g2738 812 CDD B_lectin 34 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2738 Gso-Chr11 43305393 43309635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2738 443 788 Receptor kinase-like Gene Family AT4G23230 51.734 2.17e-117 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g2738 PK_Tyr_Ser-Thr 7.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2738 - - gmx:100803488 1616.28