Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g2733 | ATGAATCACGGGATAGACATAAACCTCGTTAACTGCACAGTTGCATGGTTTAAGAAGACATCATCACACTATATTCACAGTTCTGCAGACACAGTGACAGTGTTGAGCACTAATATTATGGGATTCCTAAATGCTTTGCTCATAGTATTTCCCATCATTTTCCTGGGTTTGACCTCTGCCACGGACACCCTTACATCTTCTCAATCCATTAGAGACTCAGAGACAGTAGTAACTTCAAACGACAGTGTCTTCAAACTTGGTTTCTTCAGCCCTCAAAATTCAACACACCGCTACGTAGGAATCTGGTACCTCTCTGACTCCAACGTCATATGGATAGCTAACAGAAACAAACCACTCTTAGATTCTTCTGGGGTTTTGAAAATCTCCAAAGACGGTAACCTCGTGCTAGTTGATGGAAAAAACCATGTTATTTGGTCGTCAAATGTGTCAAACACTGCAACAATCACTTCCACCGCTCAACTTTCACGTTCCGGGAATCTAGTGCTGAAAGATGACTCCACTGGACAGACCCTATGGGAGAGCTTCAAGCATCCTTGTGATTCAGCAGTGCCAACCATGAGGATCAGTGCTAACAGAATCACAGGTGAGAAAATACGGTTTGTGTCGAGGAAAAGCGCTTCTGATCCTTCTACTGGCTACTTCTCTGCTTCCCTTGAACGTTTGGATGCTCCAGAAGTGTTTTTGTGGATTAATGGAACTCGCCCTTATTGGAGGACTGGTCCATGGAATGGTAGAATCTTCATTGGGACACCACTGATGTCAACTGGGTATTTGTATGGATGGAATGTAGGATATGAAGGGAATGAAACTGTTTATCTAACTTACAGTTTCGCCGATCCTTCTTCGTTTGGAATCCTTACCTTGATTCCACAAGGAAAGCTTAAATTGGTAAGGTATTATAACAGAAAGCACACGTTGACTTTGGATTTGGGAATTTCTGATTGTGATGTTTATGGCACGTGTGGGGCATTTGGAAGCTGTAATGGGCAGAATTCACCAATATGCAGCTGTTTGAGTGGATATGAACCAAGGAATCAAGAGGAGTGGAGTAGGCAAAATTGGACTAGTGGGTGTGTGAGAAAGGTGCCACTCAAGTGTGAGAGGTTTAAAAATGGGAGTGAAGATGAGCAAGAAGATCAATTTTTGAAACTTGAAACTATGAAAGTTCCAGACTTCGCGGAGAGGTTGGATGTCGAGGAAGGTCAATGTGGAACGCAGTGCTTGCAGAATTGCTCTTGTTTGGCGTATGCATATGATGCTGGCATTGGATGCTTGTATTGGACTAGAGACTTAATTGACTTACAAAAATTCCAAACTGCAGGAGTTGATCTCTACATCCGTCTCGCCCGTTCAGAATTTCAATCCAGTAATGCACAAGAGCATACTAATAAGACAAGAGGCAAGAGATTAATCATTGGAATTACAGTGGCAACTGCTGGAACAATTATCTTTGCCATCTGTGCTTATCTAGCCATTCGTAGATTTAACTCGTGGAAGGGAACTGCTAAAGATTCGGAAAATCAGAGTCAAAGGGTGACTGAGGTCCAGAAACCAGCTAAACTGGATGAGCTACCGCTATTTGATTTTGAAGTCGTTGCAAATGCCACAGACAACTTTCACTTAGCTAATACGCTTGGAAAGGGCGGTTTCGGTCCGGTGTACAAGGGATTATTGCCAGATGGCCAGGAAATTGCAGTGAAAAGACTCGCCAAAGCATCTGGACAAGGTCTAGAAGAATTTATGAATGAAGTGGGGGTCATTTCTAAGCTACAACATCGCAATCTTGTAAAACTTCTCGGATGCTGTGTTGAAGGAGATGAAAAGATGCTCATCTATGAGTTCATGCCAAATAAAAGTTTAGATGCATTCATCTTTGACCCACTCCGGCAGAAACTGCTAGACTGGACAAAACGTTTTAATATAATTGAAGGAGTTGCTCGTGGCTTACTCTATCTTCATAGAGATTCTAGATTAAAAATCATACATAGAGATTTGAAGGCAAGCAATATCTTGCTAGATGCAGAGATGAATCCAAAAATATCAGACTTTGGTTTGGCTAGAATATATAAAGGCGAGGATGAAGTTAATACCAAAAGAGTTGTTGGCACATATGGCTACATGTCCCCGGAATATGCAATGGAAGGACTGTTTTCTGAGAAATCAGATATCTATAGCTTTGGTGTTTTGTTATTGGAGATTATTAGTGGAAAAAGAAACACTAGTTTTCGTAATGATGACCAGTCTCTCAGCCTTATAGGATATGCGTGGAATCTATGGAACGAAGACAATATTAGTTTTTTGGTTGATCCAGAGATATCAGCTTCAGGATCCGAGAATCATATTTTTAGGTGCATTCACATAGCATTTCTATGCGTGCAAGAAGTTGCAAAAACAAGACCAACTATGACTACTGTGCTTTCGATGCTTAATAGTGAGATTTCCCACCTCCCTCCTCCTAGGCAAGTCGGATTTGTTCAGAAGCAAAGTTCATCAAGTTTAGAGTCTTCTTCTCAAGAAAATCAGTTTAACTCCAACAACCATGTAACTCTTACCGAGATGCAAGGCAGATAA | 2592 | 0.4136 | MNHGIDINLVNCTVAWFKKTSSHYIHSSADTVTVLSTNIMGFLNALLIVFPIIFLGLTSATDTLTSSQSIRDSETVVTSNDSVFKLGFFSPQNSTHRYVGIWYLSDSNVIWIANRNKPLLDSSGVLKISKDGNLVLVDGKNHVIWSSNVSNTATITSTAQLSRSGNLVLKDDSTGQTLWESFKHPCDSAVPTMRISANRITGEKIRFVSRKSASDPSTGYFSASLERLDAPEVFLWINGTRPYWRTGPWNGRIFIGTPLMSTGYLYGWNVGYEGNETVYLTYSFADPSSFGILTLIPQGKLKLVRYYNRKHTLTLDLGISDCDVYGTCGAFGSCNGQNSPICSCLSGYEPRNQEEWSRQNWTSGCVRKVPLKCERFKNGSEDEQEDQFLKLETMKVPDFAERLDVEEGQCGTQCLQNCSCLAYAYDAGIGCLYWTRDLIDLQKFQTAGVDLYIRLARSEFQSSNAQEHTNKTRGKRLIIGITVATAGTIIFAICAYLAIRRFNSWKGTAKDSENQSQRVTEVQKPAKLDELPLFDFEVVANATDNFHLANTLGKGGFGPVYKGLLPDGQEIAVKRLAKASGQGLEEFMNEVGVISKLQHRNLVKLLGCCVEGDEKMLIYEFMPNKSLDAFIFDPLRQKLLDWTKRFNIIEGVARGLLYLHRDSRLKIIHRDLKASNILLDAEMNPKISDFGLARIYKGEDEVNTKRVVGTYGYMSPEYAMEGLFSEKSDIYSFGVLLLEIISGKRNTSFRNDDQSLSLIGYAWNLWNEDNISFLVDPEISASGSENHIFRCIHIAFLCVQEVAKTRPTMTTVLSMLNSEISHLPPPRQVGFVQKQSSSSLESSSQENQFNSNNHVTLTEMQGR* | 864 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g2733 | 863 | SUPERFAMILY | Protein kinase-like (PK-like) | 530 | 850 | IPR011009 | - | |
Gso11g2733 | 863 | Gene3D | Phosphorylase Kinase; domain 1 | 504 | 621 | - | - | |
Gso11g2733 | 863 | CDD | B_lectin | 67 | 185 | IPR001480 | - | |
Gso11g2733 | 863 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE | 51 | 862 | - | - | |
Gso11g2733 | 863 | Gene3D | - | 57 | 183 | IPR036426 | - | |
Gso11g2733 | 863 | SMART | serkin_6 | 546 | 821 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g2733 | 863 | Pfam | Protein tyrosine and serine/threonine kinase | 547 | 815 | IPR001245 | GO:0004672|GO:0006468 | |
Gso11g2733 | 863 | Pfam | D-mannose binding lectin | 109 | 211 | IPR001480 | - | |
Gso11g2733 | 863 | SMART | ntp_6 | 383 | 455 | IPR003609 | - | |
Gso11g2733 | 863 | PIRSF | SRK | 33 | 863 | IPR024171 | GO:0004674 | |
Gso11g2733 | 863 | Pfam | S-locus glycoprotein domain | 244 | 351 | IPR000858 | GO:0048544 | |
Gso11g2733 | 863 | Gene3D | Transferase(Phosphotransferase) domain 1 | 622 | 823 | - | - | |
Gso11g2733 | 863 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 51 | 862 | - | - | |
Gso11g2733 | 863 | CDD | STKc_IRAK | 552 | 817 | - | - | |
Gso11g2733 | 863 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 667 | 679 | IPR008271 | GO:0004672|GO:0006468 | |
Gso11g2733 | 863 | CDD | PAN_AP_plant | 369 | 456 | - | - | |
Gso11g2733 | 863 | ProSiteProfiles | Bulb-type lectin domain profile. | 61 | 182 | IPR001480 | - | |
Gso11g2733 | 863 | ProSiteProfiles | Protein kinase domain profile. | 546 | 820 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso11g2733 | 863 | Pfam | PAN-like domain | 383 | 441 | IPR003609 | - | |
Gso11g2733 | 863 | SMART | blect_4 | 67 | 185 | IPR001480 | - | |
Gso11g2733 | 863 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 99 | 251 | IPR036426 | - | |
Gso11g2733 | 863 | ProSiteProfiles | PAN/Apple domain profile. | 373 | 456 | IPR003609 | - | |
Gso11g2733 | 863 | MobiDBLite | consensus disorder prediction | 834 | 863 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g2733 | Gso-Chr11 | 43261551 | 43265410 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g2733 | 469 | 844 | Receptor kinase-like Gene Family | AT4G05200 | 50.524 | 8.83e-124 | 387 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Gso11g2733 | PK_Tyr_Ser-Thr | 9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g2733 | - | - | gmx:112998788 | 1727.61 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso11g2733 | 11 | 43261551 | 43265410 | Gso7g1604 | 7 | 37834843 | 37839219 | PCT | |
Gso11g2733 | 11 | 43261551 | 43265410 | Gso8g0507 | 8 | 4701672 | 4706376 | PCT |