Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2732 ATGATTATGGATATCACAAGTCTCATACTTGCTCTGTTCATAGTTTACTGTTTTTGTCAGTGCTTAAGTTCTGCCAACAATACCATTACATCAGGCCAATACATCACAGACCCTCACACTCTCATCTCCCCTAACAGTGTCTTCAAGTTAGGATTCTTCAGCCCTCAAAACTCATCAAATCGCTACCTGGGAATCTGGTATCTCTCTGACTCCAATGTCATATGGGTAGCTAACAGAAACCAGCCACTAAAGACGAGCTCTTCCGGAACTGTTCAAATTTCTGAGGATGGCAATCTTGTGGTTCTAGATAGCAACAAAAGGGTTGTTTGGTCATCAAATGTGACACATAATATTGCAACCAATTCAACTGCCAAACTTTTAGAGACCGGAAATCTAGTCCTGATAGATGATGCCACAGGAGAAAGTATGTGGGAGAGTTTCCGACATCCTTGTCATGCTCTCGTGCCAAAGATGAAACTAAGTATTACCCAAAAAACATACGAGAAAGTACGCATAACATCATGGAGAAGTCCCTCTGATCCTTCTCTTGGGTACTACTCTGCTACTCTTGAACGCCCCAACATTCCAGAAGTGTTTTACTGGATTAATGAAACGCAACCGTATTATCGGACTGGTCCATGGAATGGTCAGATTTTTATTGGCTCGCCTCAGATGTCACGTGGTTATCTATATGGATGGAATATGATGAATGATGAAGATGATGGAACTGTCTATCTTTCTTACAATTTGCCAAGTCAATCTTACTTTGCAGTCATGACCTTGAATCCACAGGGTCACCCTACAATCGAATGGTGGAGGGACCGAAAGTTAGTGTGGAGGGAGGTGTTGCAAGGAAACTCATGTGATCGTTATGGTCATTGTGGGGCATTTGGAAGCTGTAATTGGCAGAGTTCACCAATATGCAACTGTTTGAGTGGATATAAACCTAAATATGTAGAGGAGTGGAATAGAAAAAATTGGACTAGTGGATGTGTGAGGAGTGAGCCACTGCAATGTGGTGAACAAACAAATGGAAGTGAAGTCAGCAAAGATGGGTTTTTGAGGCTTGAGAATATGAAAGTTTCAGACTTTGTACAAAGGTTAGATTGTTTGGAAGATGAATGCAGAGCACAGTGTTTGGAGAATTGCTCTTGTGTGGCCTATGCATATGACAATGGCATAGGATGCATGGTTTGGAGTGGAGACTTGATCGACATACAGAAGTTCTCAAGTGGAGGGATTGATCTTTACATTCGTGTGCCACCTTCAGAATCAGAACTTGAAAAACATTCAGACAAAAGAAGACACAAGACAATTTTAATTCCAGTTGGAATAACTATAGGAATGGTTGCCTTGGCTGGCTGTGTTTGTCTCTCACGGAAATGGACTGCTAAATCAATAGGAAAAATAAATTCACAACGGCAAGGAATGAACGAAGATCAGAAACAAGTCAAATTGAATGATCACTTACCGTTTTTTAGTTTTGAAGAACTTGTAAATGCTACAAATAATTTTCACTCGGCCAACGAGCTAGGTAAAGGAGGTTTTGGTTCAGTATATAAGGGACAATTGAAAGATGGACACGAAATAGCAGTGAAAAGACTTTCAAAAACCTCAGGACAAGGGCTAGAAGAGTGTATGAATGAGGTATTAGTGATTTCAAGGCTTCAACATCGCAATCTTGTCAGACTTCTTGGTTGCTGTATTGAACAGGAGGAAAATATGTTGGTATACGAGTATATGCCTAACAAGAGTTTGGATGTAATATTATTTGATCCAGCTAAAAAGCAGGATCTAGATTGGCCAAAACGCTTCAATATAATTGAAGGAATCTCTAGGGGTTTGCTTTATCTCCACAGAGATTCTAGAATAAAAATTATACACAGAGACTTAAAGGTTAGTAACATCTTGTTGGATGGAGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCCAAAATATTTGGAGGAAATGATATGCAAGCCAATACTAGAAGGGTTGTTGGAACATTTGGTTATATGCCTCCAGAATATGCATTCCAAGGGTTGGTTTCTGAGAAATTAGATGTCTTTGGTTTTGGAGTCTTGTTGCTAGAGATTATTAGTGGGAGAAAAATCAGCAGCTGCTTCGATCATGACCAATCATTGAGTCTCTTAGGATTTGCTTGGAAATTATGGAATGAAAAGGACATCCAATCACTGATAGACCCAGAAATATCGAATCCAAATAATGTGAATGACATTGTGAGATGCATACACATAGGACTTCTTTGTTCACAAGAACTTGCAAAAGAAAGGCCACTTATGGCTACAGTAGTTTCAATGCTTAATAGTGAGATTGTCGATCTTCCTCCCCCATTAAATCCCGCATTCATCAAAAGGCAAATTGTATCATGTGCAGATTCATCTCAACAGAATCACATAACACAGTCCATCAACAATGTTACTGTCACAGGCATACAAGGTAGATAG 2472 0.3964 MIMDITSLILALFIVYCFCQCLSSANNTITSGQYITDPHTLISPNSVFKLGFFSPQNSSNRYLGIWYLSDSNVIWVANRNQPLKTSSSGTVQISEDGNLVVLDSNKRVVWSSNVTHNIATNSTAKLLETGNLVLIDDATGESMWESFRHPCHALVPKMKLSITQKTYEKVRITSWRSPSDPSLGYYSATLERPNIPEVFYWINETQPYYRTGPWNGQIFIGSPQMSRGYLYGWNMMNDEDDGTVYLSYNLPSQSYFAVMTLNPQGHPTIEWWRDRKLVWREVLQGNSCDRYGHCGAFGSCNWQSSPICNCLSGYKPKYVEEWNRKNWTSGCVRSEPLQCGEQTNGSEVSKDGFLRLENMKVSDFVQRLDCLEDECRAQCLENCSCVAYAYDNGIGCMVWSGDLIDIQKFSSGGIDLYIRVPPSESELEKHSDKRRHKTILIPVGITIGMVALAGCVCLSRKWTAKSIGKINSQRQGMNEDQKQVKLNDHLPFFSFEELVNATNNFHSANELGKGGFGSVYKGQLKDGHEIAVKRLSKTSGQGLEECMNEVLVISRLQHRNLVRLLGCCIEQEENMLVYEYMPNKSLDVILFDPAKKQDLDWPKRFNIIEGISRGLLYLHRDSRIKIIHRDLKVSNILLDGELNPKISDFGMAKIFGGNDMQANTRRVVGTFGYMPPEYAFQGLVSEKLDVFGFGVLLLEIISGRKISSCFDHDQSLSLLGFAWKLWNEKDIQSLIDPEISNPNNVNDIVRCIHIGLLCSQELAKERPLMATVVSMLNSEIVDLPPPLNPAFIKRQIVSCADSSQQNHITQSINNVTVTGIQGR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2732 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Gso11g2732 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 822 - -
Gso11g2732 823 SMART blect_4 32 150 IPR001480 -
Gso11g2732 823 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 20 822 - -
Gso11g2732 823 SMART serkin_6 505 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2732 823 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Gso11g2732 823 Gene3D Phosphorylase Kinase; domain 1 465 580 - -
Gso11g2732 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 216 IPR036426 -
Gso11g2732 823 ProSiteProfiles PAN/Apple domain profile. 339 421 IPR003609 -
Gso11g2732 823 Pfam Protein tyrosine and serine/threonine kinase 508 775 IPR001245 GO:0004672|GO:0006468
Gso11g2732 823 CDD STKc_IRAK 511 777 - -
Gso11g2732 823 Pfam PAN-like domain 348 406 IPR003609 -
Gso11g2732 823 ProSiteProfiles Protein kinase domain profile. 505 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2732 823 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Gso11g2732 823 CDD B_lectin 26 150 IPR001480 -
Gso11g2732 823 Gene3D - 21 147 IPR036426 -
Gso11g2732 823 CDD PAN_AP_plant 336 421 - -
Gso11g2732 823 SMART ntp_6 348 420 IPR003609 -
Gso11g2732 823 Pfam D-mannose binding lectin 73 176 IPR001480 -
Gso11g2732 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Gso11g2732 823 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Gso11g2732 823 SUPERFAMILY Protein kinase-like (PK-like) 488 807 IPR011009 -
Gso11g2732 823 Gene3D Transferase(Phosphotransferase) domain 1 581 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2732 Gso-Chr11 43255436 43259289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2732 493 823 Receptor kinase-like Gene Family AT4G11530 53.846 3.98e-117 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g2732 PK_Tyr_Ser-Thr 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2732 - - gmx:100800296 1697.56