Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2725 ATGGAGTTTGATCTTGAAGACCCACTAGTCAGCTTGGAAGAAGAGCAAACCTTTACTATATCAGAACTCTTTGCCTCCGAATCTGAACACGTGCCCTCACCAAACTGCTTAAGTTCAACACATTTTCACGTTTTCTGTGGTGAAGCCATATCTCTCATTCTTCAGGTTCAGGTTTCTTGCAAATTGGACCAATTTGTAGCTTATCTTGCTATAAATTACTTGCACCGTTTCATGTCATGCCAAGAAATTCCGCAGGGAAAGCCGTGGTTTCTCAGGCTTCTTGTCATATCATGTCTTTCTCTTGCTTCAAAGATGAAGAACACAACTTTATCAATTTTGGATATGCAAAAAGAAGGTTGTTACTTTAAGGCTCAGAGTATTCAGAGAATGGAGCTTCTTATTCTCGGGGCTCTGAAATGGCGCATGAGGTCAATTACGCCTTTTTCTTTCCTTCATTTCTTTATCTCTTTAGCTGAAATTAAAGACCAATCACTAAAGCAAACACTTAAAAATAGAGCTTCAGAGATAATCTTCAATGCTCAAAATGGCATTAAGTTTTTAGAGTATAAACCTTCAACTATTGCTGCAACTAGCCTTATCTTTGCATCTCATGAACTATTCCCACAGCAATATTCTACTCTGAGAGCTTCAATTACAGCCTGTGAGTACCTAGATGAGGAGACATTGTCCAAGTGCTTCGATTTGATGCAAGACATGATGAGAATGGAAGCAAAGGAGTTAATGGCAGATACAAGCTTTTTAAGCACAGAAACTCTAGTGAGTGTGTTGGAGAGAAACACTAAACGACAAAGAATTTGA 819 0.3871 MEFDLEDPLVSLEEEQTFTISELFASESEHVPSPNCLSSTHFHVFCGEAISLILQVQVSCKLDQFVAYLAINYLHRFMSCQEIPQGKPWFLRLLVISCLSLASKMKNTTLSILDMQKEGCYFKAQSIQRMELLILGALKWRMRSITPFSFLHFFISLAEIKDQSLKQTLKNRASEIIFNAQNGIKFLEYKPSTIAATSLIFASHELFPQQYSTLRASITACEYLDEETLSKCFDLMQDMMRMEAKELMADTSFLSTETLVSVLERNTKRQRI* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2725 272 PANTHER CYCLINS 5 270 IPR039361 -
Gso11g2725 272 SUPERFAMILY Cyclin-like 19 142 IPR036915 -
Gso11g2725 272 SMART Cyclin_C_2 145 262 IPR004367 -
Gso11g2725 272 CDD CYCLIN 49 135 IPR013763 -
Gso11g2725 272 SMART cyclin_7 51 136 IPR013763 -
Gso11g2725 272 Gene3D - 33 143 - -
Gso11g2725 272 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 270 - -
Gso11g2725 272 Pfam Cyclin, N-terminal domain 23 142 IPR006671 -
Gso11g2725 272 SUPERFAMILY Cyclin-like 126 246 IPR036915 -
Gso11g2725 272 Pfam Cyclin, C-terminal domain 145 241 IPR004367 -
Gso11g2725 272 Gene3D - 22 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2725 Gso-Chr11 43204197 43206224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2725 1 265 Core Cell Cycle Gene Families AT4G03270 41.637 2.11e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2725 K18812 - gmx:100799763 536.184