Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2722 ATGGGGAGAGCACCTTGTTGTGACAAGAATGGCCTCAAGAAAGGACCATGGACAACCGAGGAGGACCAGAAACTCATTGATTACATTCAGAAACATGGATATGGCAATTGGAGGACACTCCCAAAGAATGCTGGGTTGCAAAGGTGTGGAAAGAGTTGCCGTCTCCGTTGGACAAACTATCTACGACCAGATATAAAGCGAGGTCGGTTTTCATTTGAAGAGGAAGAGACAATAATTCAACTACATAGCATTCTTGGCAACAAATGGTCTGCCATTGCATCTCGCTTACCAGGAAGGACTGACAATGAAATAAAGAATTATTGGAACACTCACATTAGAAAAAGGCTTCTGAGGATGGGAATTGACCCAGTGACACACAGTCCTCGACTTGATCTATTGGACATCAATTCCATTCTAAACGCATCTTTCTATGGTTCATCACAAATCAACATCCAAAGGCTCCTTGGCATGCACCAGTACGTGGTGAACCCTGAGCTTTTAAAATTGGCTTCTTCACTCTTCTCCACCTCGCAGCAACACAATCATGACCCTGATGACATGTGTGCTCAAAAAGGTCAACAGAATCAGCTTTGCGATCCTCAAATTCAGAACCATGTTCCACACTTTGTCCAATATCAAGATCCAATTCAAGAAGTGCCTGCATGCAGCACCATGTTCAGCACCCCTTGTTTTTCAATGCCTCTAACTCAACCACAGTTGGTTGAGCCAAATAATGTGGACCAATATACATCATCAACTTTCACAGACTTCAGTTACCAACAACTAAGTGATTGGCACAAAGATGGGATTGCGTTAAGCACCTTAACAGATGACTATATGCCTCAGTTATCAAGCTATAATAATTATTATAGTTCTAATAGTCATCAAAATCTCATGTATCCTCAAGTGTCCGAACCTTCAACTTTTCATTCCAATAACAGCAATCATCAGAACTTCAGCTTCGCTTCAGTTCTATCAACACCTTCGTCAAGCCCCACACCGCTGAATTCGAACTCCACGATAATCAATGGGAGCAACACAGAAGACGAGAGAGACCAAAGCTATGACAGTAGTAACATGTTGAAATTTGAAATCCCAGATATTTTAGATGTGAATGAGTTCATGTAA 1128 0.4176 MGRAPCCDKNGLKKGPWTTEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDINSILNASFYGSSQINIQRLLGMHQYVVNPELLKLASSLFSTSQQHNHDPDDMCAQKGQQNQLCDPQIQNHVPHFVQYQDPIQEVPACSTMFSTPCFSMPLTQPQLVEPNNVDQYTSSTFTDFSYQQLSDWHKDGIALSTLTDDYMPQLSSYNNYYSSNSHQNLMYPQVSEPSTFHSNNSNHQNFSFASVLSTPSSSPTPLNSNSTIINGSNTEDERDQSYDSSNMLKFEIPDILDVNEFM* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2722 375 Gene3D - 13 66 - -
Gso11g2722 375 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gso11g2722 375 CDD SANT 69 112 IPR001005 -
Gso11g2722 375 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 304 370 - -
Gso11g2722 375 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 272 - -
Gso11g2722 375 CDD SANT 16 61 IPR001005 -
Gso11g2722 375 MobiDBLite consensus disorder prediction 323 359 - -
Gso11g2722 375 SMART sant 13 63 IPR001005 -
Gso11g2722 375 SMART sant 66 114 IPR001005 -
Gso11g2722 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gso11g2722 375 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Gso11g2722 375 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gso11g2722 375 PANTHER PROTEIN ODORANT1-LIKE 304 370 - -
Gso11g2722 375 PANTHER PROTEIN ODORANT1-LIKE 1 272 - -
Gso11g2722 375 MobiDBLite consensus disorder prediction 323 348 - -
Gso11g2722 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gso11g2722 375 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gso11g2722 375 Gene3D - 69 116 - -
Gso11g2722 375 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2722 Gso-Chr11 43173461 43175281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2722 1 375 MYB Transcription Factor Family AT4G21440 54.005 8.62e-117 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso11g2722 Myb_DNA-binding 6.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2722 K09422 - gmx:778071 738.028