Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2718 ATGTCGAGTATCACTTTCTTCCACCGTCTCTCTAGTGCTTTCCGTGACAACCAGTCGCATCTTAAGCTTGTACTGCTCTGCACCGCCGTAAGTGGTGGTGGCCTTTGGGCTTATGGTGAGAGTGTTGCACCTGAAGAGGCAGTTACGGAGAAGAAGAAGGTGGTGGTGCTGGGAACTGGTTGGGCGGCCACAAGTTTTATGAAGAATTTGAACAATCCAAAATATGAGATTCAAGTAGTTTCGCCTCGTAATTACTTTGCATTCACCCCTTTGCTGCCTAGCGTTACGTGCGGGACAGTCGAAGCGCGCAGCATTGTTGAACCAGTTCGCAATATTTTTAAGCAGAAAAAGGTGGACGTACAATTCAGTGAAGCAGAATGTTTCAAGATTGATGCAGAAAATAGGAAAGTTTACTGTCGATCTAGTGTGAACAATAATTTGGATGGGAAAGAAGAATTTGTTGTGGATTATGACTACCTAATAGTGGCGGTGGGCGCTAATGTCAATACGTTTAATACTCCAGGAGTGACGGAGAATTGCCATTTTTTGAAGGAAGTTGAAGATGCTCAAAAGATTAGAAGAACAGTTATTGACTGCTTTGAAAGAGCAAATTTGCCTGATGTTAGTGAAGATGAGAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGACCTACTGGAGTGGAGTTTGCAGCCTCACTTCATGATTTTGTCAATGAGGATTTGGTCCGTTTATATCCTGGAATTAAAGATTTAGTTAAAATTACACTTTTGGAGGCGGGCAATCATATCTTGGGCATGTTTGACAAGAGAATCACTGCTTTTGCTGAAGACAAGTTTCGAAGAGATGGGATTGATGTGAAAACAGGATCCATGGTTGTTAAGGTATCTGAGAAAGAAATTTCCACTAAAGAACTGAAAAATGGAGAGATTAAGACAATTCCGTATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATTAAAGATTTTATGGCACAAATTGGTCAGGCTAGCAGGCGTGCCCTAGCTACAGACGAATGGTTGAGAGTTGAGGGGTGCAACAATGTCTACGCGCTCGGTGACTGTGCCACAATAAACCAGCGAAAAGTCATGGAAGATATTGTGGCGATCTTTAAGAAGGCTGACAAAGACAATTCTGGAACACTTACGGTCATACAATTTCAAGAGGTCATGAAAGATATCTGTGAAAGATACCCTCAGGTTGAGCTATATCTGAAGAATAAACAGATGGGCAACATTGCTGATTTATTGAAGGAAGCCAAGGGAGATGATAAAAAAGAATCAATTGAGCTGAATATTGAAGAACTCAAAACTGCACTTTCCAAAGTGGATTCTCAAATGAAATTTCTTCCTGCTACAGCCCAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTTTTAACCGGATGGAAGAGTGTGAAAAAAATCCAGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCACCATCGGTTCAAACCCTTTAGGTACAAGCATTTAGGTCAATTTGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGAGATTGGGTTTCAATTGGCCATAGCAGTCAATGGCTGTGGTATTCTGTCTATGCAAGTAAGCAAGTAAGCTGGCGTACAAGAGCGTTAGTAGTTTCAGACTGGACAAGACGTTTTATTTTTGGAAGGGACTCAAGTAGCATCTGA 1731 0.4269 MSSITFFHRLSSAFRDNQSHLKLVLLCTAVSGGGLWAYGESVAPEEAVTEKKKVVVLGTGWAATSFMKNLNNPKYEIQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFKQKKVDVQFSEAECFKIDAENRKVYCRSSVNNNLDGKEEFVVDYDYLIVAVGANVNTFNTPGVTENCHFLKEVEDAQKIRRTVIDCFERANLPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDLVKITLLEAGNHILGMFDKRITAFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGEIKTIPYGMAVWSTGIGTRPFIKDFMAQIGQASRRALATDEWLRVEGCNNVYALGDCATINQRKVMEDIVAIFKKADKDNSGTLTVIQFQEVMKDICERYPQVELYLKNKQMGNIADLLKEAKGDDKKESIELNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPLRFRGEGHHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSSI* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2718 576 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Gso11g2718 576 PRINTS FAD-dependent pyridine nucleotide reductase signature 157 175 - -
Gso11g2718 576 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Gso11g2718 576 PANTHER NADH DEHYDROGENASE 3 576 IPR045024 GO:0003954|GO:0006116
Gso11g2718 576 PANTHER NAD(P)H DEHYDROGENASE B2 3 576 - -
Gso11g2718 576 SUPERFAMILY EF-hand 367 463 IPR011992 -
Gso11g2718 576 Coils Coil 438 458 - -
Gso11g2718 576 Gene3D - 42 420 - -
Gso11g2718 576 Gene3D - 421 575 - -
Gso11g2718 576 SUPERFAMILY FAD/NAD(P)-binding domain 218 371 IPR036188 -
Gso11g2718 576 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 379 IPR023753 GO:0016491
Gso11g2718 576 SUPERFAMILY FAD/NAD(P)-binding domain 51 270 IPR036188 -
Gso11g2718 576 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2718 Gso-Chr11 43120934 43126296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2718 1 576 Chloroplast and Mitochondria Gene Families AT4G21490 73.024 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2718 K03885 - gmx:100797657 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0581 15 5126036 5131167 Gso11g2718 11 43120934 43126296 GST
Gso7g1615 7 37984743 37990205 Gso11g2718 11 43120934 43126296 PCT
Gso8g0498 8 4565630 4572312 Gso11g2718 11 43120934 43126296 PCT
Gso11g2718 11 43120934 43126296 Gso7g1615 7 37984743 37990205 PCT
Gso11g2718 11 43120934 43126296 Gso8g0498 8 4565630 4572312 PCT