Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2700 ATGAGAACGGAGGTGATGGGGAGGTGGGGCACCTGGGAAGAGCTCCTCCTTGGTGGCGCCGTTCTCCGCTACGGAGCCCGGAATTGGAAAGTCGTCGCCGCCGAGCTACGGGCACGAACAGTTTGTCCCTACATCATTACACCTGAGGTCTGTAAAGCCAAATATGAAGACTTGCAAAAGCGGTACTCTGGGAACAAGGCTTGGTTTGAGGAACTTAGGAAGACTAGAGTAGCAGAGCTGAAAAGAGCTCTGGAGGTGTCTGAAGATTCTATTGGGTCTCTTGAATCTAAACTTGAAAGCCTTAAGGCTGGAAAGAATGAGAAAAAAGATGATCGTTATGTTGACAAAGGATCGGCTCGTCCAAAGTTACATGTAGCCTCACAGAAATTGGAAAGAGTTGAATCTTCCACCAAAGAGACATCAAAAGATGGGCTATCTGCTGGGAGTTTCACACATGAAACCAGGACAAACTGGTCTCCTGAATGTCCGGTTCCAGCACGGTCTGTGGAAGATATGGAGACTAAGCCTGAGGTTTCACACTCCACTGAGCAGGCCAAAGTTTTGAATGTAGATAATCGGGCACATACTATATACGAAGGACAAGGAGGAAGTCTTAAAAAACGGAGAGGGAAGAGGAAGAGGAAGGATTGTGGCAGAAATATGAAGGAAGCAAGTGTTGGGGAAAGTGACTTGTTAGATTCGGCTGACATTGTGTCATGGTGTAAAGAAAGTTCGACCAGCAACTGTGGTGAAGTTGCCAAATCATGTGGTGTAGATGATCAAAATAGGAACTTAAAAAAGGATAGGGTGGAAGACATGATGGAGATTTTGGATTTTATATTTGAAACTAAAGGTGCTCCGGCTTTCCGACGCAGACTTGATAGTCAGAAGAGAGGAAGGTACAAGAAAATGATCCGGCAACATATGGACTTTGACACTATAAGGTCAAGAATTAGCAGCCAGACAATTAAGTCGAGTGTAGAACTTTTCAGGGACTTGCTCCTACTCACTAACAATGCCTTAGTCTTCTACTCCAAGAGCACTCGTGAATACAAAACTGTTCTACTGCTAAGAGGCATTGTGACCAAAAAAATGAAGGAAACTTTGAAGGGTACTACGAGCAACAAAGTCACCACTCAAGCTACCAATGTTCCTATTAAACTACCTGTGCATAATCCTCATGTGAAACCAAGAAGTGTAAGGCCAGGCAACAGAAAAATAGTTGCAAAGGCAGTTGGTGGCAACAACTCTGCATCTGGGGTGTCACATGGAACTAAGAAACCTAGTAAAGTTGAATCTCCATCCTCAGTGGAATCCTTAACTGTGAAGAAAAAAGGTTTTGGTCGACCAAAAAAGGTTGGACGTGGGGCTGCAGGTCAGAGGCCTGCAATGCCAATGAAGGGAAAGAAAAGAGTTAGGACAAAGTGA 1428 0.4468 MRTEVMGRWGTWEELLLGGAVLRYGARNWKVVAAELRARTVCPYIITPEVCKAKYEDLQKRYSGNKAWFEELRKTRVAELKRALEVSEDSIGSLESKLESLKAGKNEKKDDRYVDKGSARPKLHVASQKLERVESSTKETSKDGLSAGSFTHETRTNWSPECPVPARSVEDMETKPEVSHSTEQAKVLNVDNRAHTIYEGQGGSLKKRRGKRKRKDCGRNMKEASVGESDLLDSADIVSWCKESSTSNCGEVAKSCGVDDQNRNLKKDRVEDMMEILDFIFETKGAPAFRRRLDSQKRGRYKKMIRQHMDFDTIRSRISSQTIKSSVELFRDLLLLTNNALVFYSKSTREYKTVLLLRGIVTKKMKETLKGTTSNKVTTQATNVPIKLPVHNPHVKPRSVRPGNRKIVAKAVGGNNSASGVSHGTKKPSKVESPSSVESLTVKKKGFGRPKKVGRGAAGQRPAMPMKGKKRVRTK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2700 475 MobiDBLite consensus disorder prediction 125 139 - -
Gso11g2700 475 MobiDBLite consensus disorder prediction 102 119 - -
Gso11g2700 475 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 1 475 - -
Gso11g2700 475 SUPERFAMILY Bromodomain 264 370 IPR036427 GO:0005515
Gso11g2700 475 Gene3D - 259 376 IPR036427 GO:0005515
Gso11g2700 475 MobiDBLite consensus disorder prediction 102 164 - -
Gso11g2700 475 PANTHER BROMODOMAIN PROTEIN 1 475 - -
Gso11g2700 475 MobiDBLite consensus disorder prediction 201 221 - -
Gso11g2700 475 MobiDBLite consensus disorder prediction 412 475 - -
Gso11g2700 475 MobiDBLite consensus disorder prediction 415 440 - -
Gso11g2700 475 Coils Coil 77 111 - -
Gso11g2700 475 SMART bromo_6 266 370 IPR001487 GO:0005515
Gso11g2700 475 CDD Bromodomain 271 365 - -
Gso11g2700 475 Pfam Bromodomain 274 354 IPR001487 GO:0005515
Gso11g2700 475 ProSiteProfiles Bromodomain profile. 281 351 IPR001487 GO:0005515
Gso11g2700 475 MobiDBLite consensus disorder prediction 140 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2700 Gso-Chr11 42960662 42966132 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso11g2700 Bromodomain 2.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2700 - - gmx:100793951 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0598 15 5285652 5291153 Gso11g2700 11 42960662 42966132 GST
Gso7g1628 7 38148139 38153601 Gso11g2700 11 42960662 42966132 PCT
Gso11g2700 11 42960662 42966132 Gso7g1628 7 38148139 38153601 PCT