Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2698 ATGAGTAACATGAAGTTGGAGTTGCATGTTGGAATTTTTGTCACCTGCATGGTGATTCTCTCTGGGACTTTCTGTGTTGGAGATACTGACATGGTTGATGTTGCAGCAATAAATAGTCTTTATGTTTCTCTGGGGTCACCACCACTTCAAGGGTGGAAACCCGTGGGAGGAGATCCATGTTTGGAACTGTGGCAAGGTGTGGCTTGTGTCTTCTCCAACATAACTGCAATACACCTTGGAGGCATGAATTTGGGTGGACAGCTGGGCAGCAATTTGAATTTCCCATCAGTTATAGAATTGGATCTTAGCAACAACCACATTGAAGGGCCTATTCCATTTACTTTGCCCCCTACTCTGAGGACCTTGTCTCTCTCGGCAAATCGGTTGAATGGAAGCATTCCAGATGCTTTGTCCTTATTAACTCAATTGTCAAACTTGGACTTGTCAAATAACAACTTGAGTGGTCAGCTGCCTTCATCAACAGGGAGTTTATCATCTCTTACCACATTACACTTGCAAAACAATCAACTTTCTGGGACCCTTTATGTTTTGCAAGACCTGCCTCTCCAAGATCTGAATATAGAGAACAATTTATTCTCAGGGCCAATTCCTCCAAAATTGCTGACTATCCCCAATTTCAGTAAAAATGGGAATCCCTTTAATACTACTATTATTCCATCACCTCCTGCTGCGGCCCCTGCACCTGTAGCTATAGGTTCATCCCCCCAAGAATCGCCTTGGAAAATGGCACATGGTCCTTCTGCCCTGACAGCACCAGTGCCTGCAAGTACTAGGAAGTCTGTTATAGCTAAGAGTGTCATTTGGATTGCTGGTGCAGGCCTTTTAGTATTTATTGTATTGGGAGTTTGTCTTGTAATGTTGAGGTGCATTAAGAGAAGGCCGGAGAAGAAAAATGCTAAGAAACTTGATGATGTGGGTGTGTTTGCGGGACCTTTGAATAAACCTACATGCAGTGACTCTGATGTTGAAACAGCTAATCAAGAGGAGAAAGGTAAATGTGAAGTACCAAATAGAAGTACAAATTTCATTCCAAAGGTTCAGGAAGAACAAGACATATATGTGAAAGTAGTATCTGCAACATCAGAAGGCAATAATGGTCATGAATCAATCAACACTGGAGGGGCTTCCAAACTTTCATCCTTACAGCCACCACCACAACACTTTCTCCCAACCAGTCCTGGTGAGAAGGTCATCATCAATCCTGCTATAACTACACAAGTAACTGAAAGACAAGTTATGTCAAATTCCATCAGAGTTTATACTGTTGCATTGCTTCAACAATATACAAATAGCTTTTCCCAAGAAAACTGTATTGGGGAAGGTACACTTGGGCCTGTTTATCGGGCTGAGCTCCCTGATGGAAAGCTATTGGCTGTGAGGAAATTGGATGCTACTGCTTCCATGGGTCAGAGTCATGAACAATTTCTTCAACTGGTGTCCAGCATTTCAAAAATTCAGCATGCAAATATTGCAAGGCTTGTGGGCTACTGTGCTGAGCATAACCAACGACTACTTGTATATGAATATTGCAGTAATGGAACCCTACATGATGCACTGCATGGGGATGGCAATCACCGTATCAGACTTCCATGGAATGCACGCATTCAGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAGCTTTCGGCCATCTATTGTGCATCGAAATTTTAGGTCTGCTAATGTTCTTCTGAGCGACAATTTGGAAGTGTGCATCTCTGATTGTGGATTAGGGCCATTACTATCTTCTGGCTCTACTGGTCAGTTATCAGGACGCCTCCTTACAGCTTATGGTTACAGTGCTCCAGAATTTGAGTCTGGAAGTTATACGCAGCAAAGTGATGTCTTCAGTTTTGGTGTCGTAATGCTAGAACTCCTCACTGGACGAAAATCCTATGACAAGTCACTGCCTCGTGGAGAGCAATTTTTGGTCAGATGGGCAGTCCCTCAACTCCATGACATTGATGCATTGTCAAAAATGGTTGACCCCTGCTTAAACGGAGCCTATCCTATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTATACAGCGTGAACCTGAATTCCGGCCGGCAATGTCAGAAATTGTTCAAGATCTCTTGAGAATGATGTAA 2154 0.4313 MSNMKLELHVGIFVTCMVILSGTFCVGDTDMVDVAAINSLYVSLGSPPLQGWKPVGGDPCLELWQGVACVFSNITAIHLGGMNLGGQLGSNLNFPSVIELDLSNNHIEGPIPFTLPPTLRTLSLSANRLNGSIPDALSLLTQLSNLDLSNNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLYVLQDLPLQDLNIENNLFSGPIPPKLLTIPNFSKNGNPFNTTIIPSPPAAAPAPVAIGSSPQESPWKMAHGPSALTAPVPASTRKSVIAKSVIWIAGAGLLVFIVLGVCLVMLRCIKRRPEKKNAKKLDDVGVFAGPLNKPTCSDSDVETANQEEKGKCEVPNRSTNFIPKVQEEQDIYVKVVSATSEGNNGHESINTGGASKLSSLQPPPQHFLPTSPGEKVIINPAITTQVTERQVMSNSIRVYTVALLQQYTNSFSQENCIGEGTLGPVYRAELPDGKLLAVRKLDATASMGQSHEQFLQLVSSISKIQHANIARLVGYCAEHNQRLLVYEYCSNGTLHDALHGDGNHRIRLPWNARIQVALGAARALEYLHESFRPSIVHRNFRSANVLLSDNLEVCISDCGLGPLLSSGSTGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYDKSLPRGEQFLVRWAVPQLHDIDALSKMVDPCLNGAYPMKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLRMM* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2698 717 MobiDBLite consensus disorder prediction 370 401 - -
Gso11g2698 717 Gene3D Transferase(Phosphotransferase) domain 1 517 717 - -
Gso11g2698 717 SUPERFAMILY Protein kinase-like (PK-like) 418 713 IPR011009 -
Gso11g2698 717 PANTHER LEUCINE RICH REPEAT KINASE 2 9 146 - -
Gso11g2698 717 PANTHER LEUCINE RICH REPEAT KINASE 2 140 717 - -
Gso11g2698 717 MobiDBLite consensus disorder prediction 370 392 - -
Gso11g2698 717 PRINTS Leucine-rich repeat signature 143 156 - -
Gso11g2698 717 PRINTS Leucine-rich repeat signature 164 177 - -
Gso11g2698 717 Gene3D Ribonuclease Inhibitor 33 229 IPR032675 -
Gso11g2698 717 SUPERFAMILY L domain-like 34 209 - -
Gso11g2698 717 Pfam Protein tyrosine and serine/threonine kinase 442 713 IPR001245 GO:0004672|GO:0006468
Gso11g2698 717 Gene3D Phosphorylase Kinase; domain 1 403 516 - -
Gso11g2698 717 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 9 146 - -
Gso11g2698 717 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 140 717 - -
Gso11g2698 717 ProSiteProfiles Protein kinase domain profile. 439 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2698 Gso-Chr11 42933381 42941378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2698 23 717 Strubbelig Receptor Gene Family AT4G03390 50.336 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso11g2698 PK_Tyr_Ser-Thr 9.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2698 - - gmx:100793423 1321.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0600 15 5310741 5318719 Gso11g2698 11 42933381 42941378 GST
Gso7g1630 7 38184602 38191143 Gso11g2698 11 42933381 42941378 PCT
Gso11g2698 11 42933381 42941378 Gso7g1630 7 38184602 38191143 PCT