Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2692 ATGGACAATATAATCTACACTTTAGTTTTGATACTTTTTCTATCTCTGAAGGCCAGTAGTGTTTCTTCTAGAGATAGACAATGGGGCGGTGTGAGGAGAAAATTGAGCTTTGGGGATCATAATAATGGTGATCTTGTGACTAACTTGCCTGGCCAGCCTCCTGTAGATTTTCAGCACTATGCTGGATATGTCACAGTCAACGAAACCAATGGCCGAGCACTCTTTTATTGGTTCTATGAGGCCATGACCAAGCCTCAAGACAAACCATTAGTGCTGTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGCCCATTTTTAGTGGACACCGATGGCAAGGGCCTTAAATTCAATAACTTTTCATGGAACAAAGAGGCCAACATTTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTATTCAAATACAACCAGCGAATATGCACGACTGGGAGATGACTTCACAGCTAATGATGCTTACACTTTTCTGCACAATTGGTTCCTCAAGTTTCCATCATATATAACAAGGACATTTTATATAGCAGGAGAGAGCTATGCAGGAAAGTATGTACCGGAGCTAGCTGAACTCATCCACGATAGAAACAAGGACCCTTCCCTTCACATTGATCTCAAGGGAATTTTGCTGGGCAACCCTGAAACATCTGATGCTGAGGACTGGTCAGGTATGGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACTTACAAAACTATCAAAGCAAGCTGTGAGTTCAATAGCAGTGATCCGTGGAGTAACAAAGATTGTACTCAAGGAGTGGATGAAACACTCAAACAGTACAATGAAATTGATATCTACAGCCTCTACACCTCTGTCTGCTTCGCTAGTACAGCGCGGTCAAACGATCAATCCAAGAAAATGGTGATGAATCGCTCATCTAAAATGATGCCACGGATCATGGGAGGTTATGATCCATGTTTGGATAATTATGCTAAAACTTTTTATAATAGACCAGATGTTCAGAAGGCACTCCATGCCAGTGATGGTTACAATCTGAGGAATTGGAGTATTTGCAATGAAAACATATTCAAGGGCTGGGCACAATCGAAGCCTTCTGTTATCCCAATCTACAAGAAGCTTATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACTGATGGTAGGGTGCCAGTGCTATCAACAAGATACAGCTTAAGTATTCTAGGTTTGCCTATCACTAAGAGATGGAGGCCTTGGTACCATGAAAAGGAGGTTAGTGGGTGGTATCAAGAATACGAGGGGCTTACGTTTGCGACATTTCGGGGAGCTGGCCATGCAGTGCCTTGTTTCAAACCAAGCAACTCATTGGCATTCTTCTATTCCTTTCTTCTTGGAGAATCACCACCGTCCACAAAATAA 1437 0.4287 MDNIIYTLVLILFLSLKASSVSSRDRQWGGVRRKLSFGDHNNGDLVTNLPGQPPVDFQHYAGYVTVNETNGRALFYWFYEAMTKPQDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKGLKFNNFSWNKEANILFLESPVGVGFSYSNTTSEYARLGDDFTANDAYTFLHNWFLKFPSYITRTFYIAGESYAGKYVPELAELIHDRNKDPSLHIDLKGILLGNPETSDAEDWSGMVDYAWSHAVISDETYKTIKASCEFNSSDPWSNKDCTQGVDETLKQYNEIDIYSLYTSVCFASTARSNDQSKKMVMNRSSKMMPRIMGGYDPCLDNYAKTFYNRPDVQKALHASDGYNLRNWSICNENIFKGWAQSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSILGLPITKRWRPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKPSNSLAFFYSFLLGESPPSTK* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2692 478 Gene3D alpha/beta hydrolase 41 299 IPR029058 -
Gso11g2692 478 SUPERFAMILY alpha/beta-Hydrolases 42 472 IPR029058 -
Gso11g2692 478 ProSitePatterns Serine carboxypeptidases, serine active site. 189 196 IPR018202 GO:0004185
Gso11g2692 478 Gene3D - 377 471 - -
Gso11g2692 478 PANTHER CARBOXYPEPTIDASE 7 475 - -
Gso11g2692 478 Gene3D - 330 368 - -
Gso11g2692 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Gso11g2692 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Gso11g2692 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Gso11g2692 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Gso11g2692 478 Pfam Serine carboxypeptidase 50 469 IPR001563 GO:0004185|GO:0006508
Gso11g2692 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 475 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2692 Gso-Chr11 42875095 42879728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2692 335 472 Calmodulin-binding Proteins AT2G22960 33.094 1.18e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2692 K16297 - gmx:100819700 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0606 15 5381251 5386429 Gso11g2692 11 42875095 42879728 GST
Gso7g1634 7 38251938 38258704 Gso11g2692 11 42875095 42879728 PCT
Gso11g2692 11 42875095 42879728 Gso7g1634 7 38251938 38258704 PCT