Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2675 ATGCAAGATAAGCTTGCCATAATTGATAAAAATCAAACTTGGGAACTCGTTGAAAGACCTGAACACAGAAAAGTCATAGGTGTGAAGTGGATGTTTAGAACAAAGCTGAATGCAGATGGCTCAATCAACAAACACAAAGCATGGTTAGTATTAAAGGGGTATGCTCAAATTTTTGGAGTATATTTCTTTGATACTTTTGCTCCGGTTGCAAGGCAGGATACCATTAGGATATTGCTAGTTATCGCAACACAAAATGGATGGAAAATCTGCCAACTTGATGTCAAGTCAGCTTTCTTAAATGGATTTTTGGAGGAAGAAATCTATGTTGAGCAACATGAAGGTTTCCTTATGAAAGGACATGGGGACAAATTCTATCTATTAAAAAAGGCTTTGTATGGTTTGAAACAAGCCCCAATAGCCCAGTACAACAGGATTGATGAGTACTTATCAAAACTAGGCTTAGTTAAAAGTCTTAATGAATCTAATTTATACATCAAAGTCACTGGCAGTAATGTTGAACTTATTCAACAGTTCAAGGATGATATGATGCAAGTATTTGAGATGACAAACCTAGGAGAAATGTCCTATTTCCTTGGTATGAAGGTTAAGCAGAACAAAGGTGATATTTTCATCTGTCAGAGGAAGTATGCAAAGAAGATCCTGAAGAAATTCAACATGGAGAATTGTAAAGGGATGATGGTTCAGAACACAAGTAGAAGAAGCACTCTACAGAAGTTTAATTGGTTGCTTAATGTATCTCACAACAACAAGACCAAATATCTTGTATGTTGTAAATGTACTTTCAAAATTGATGAATTATGCAAAACAATCCCATTTGAAAGCAGCAAAAAGGGTGCTAAGGCTTTTAGCTTTGGATCAAGGATGTTCTCTTGGTGTTCCAAAAAACAAGAAACTGTTGCACAATCAACCGCTGAAGTAGAATTTATAGCAGCCACAACAGCTGTTAATCAAGCCTTATGGTTAAGGAAAATACTAACTGATTTGCACTTGGAGCAAGATACAACTATTGAAGTAATGGTGGACAATCAAGCAACCATAATCATCTCTAAAAATCCAGTGTTTCATGGAAAAACGAAGTATTTCAACATCAAATTATTCTTCCTTAGAGATGTACAGAGGATTAGTTGTTTTATTTTCTGTTACTTAGTAGCTATGTTAGTGGTTGATTATTATTTAGGAAGTCCGTTATTATTGCTTCCTGTTACAACAGATCTTTGCCATCACATCTTGCAGCTAAAAGCTTTTAATTGTTTAACTCTTATTTACTTTTGCTTGAGGGGCCAAAATTCCTTACTTACCATTTTTTTTAAAAATTTCTTTCCATTTCTATACGTATATTGCCTCATGTTTTTATTCTTTTGCTGTGCAGGCTATCCGCTAGATAATGTAAGGCAATTTTCTGATAAAGAACTGAGATTAGCAACTGATAATTATAATCCAAAGAATAAGATAGGACGAGGAGGTTTTGGAACCGTTTACCAGGGAACCTTAAGAGATGGAAGGCGTATAGCAGTGAAGACTCTCTCAGTTTGGTCAAAGCAGGGAGTTCGCGAATTTTTGACTGAAATTAAAACTTTGTCAAATGTTAAACATTCAAACCTTGTTGAATTGATTGGATTCTGCATTCAAGGACCTAGTCGTACATTAGTCTACGAGCATGTGGAAAATGGAAGCCTTAATAGTGCCCTACTTGGCACAAGGAATAAAAACATGAAACTAGAATGGAGAAAAAGGTCTGCTATTTGTCTAGGTATTGCTAAGGGTCTTGCATTTCTTCATGAAGAACTTTCACCACCTATTGTACACAGAGACATCAAAGCTAGTAATGTACTACTTGACAGAGATTTCAATCCCAAAATAGGTGATTTTGGGCTGGCTAAATTATTTCCAGATGACGTCACTCACATTAGCACAAGAATTGCTGGAACAACAGGTTACTTAGCACCGGAATATGCATTAGGTGGCCAGTTAACCAAGAAGGCTGATATATACAGCTTTGGGGTTCTTATACTTGAAATAATTAGTGGCAGAAGCAGTGCCAGAAGGACAAACGGGGGAGGATCACACAAATTCCTCTTGGAATGGGCCTGGCAACTTTATGAAGAGAGGAAATTGTTGGAGTTTGTAGATCAAGACATGGAAGAATTTCCTGAGGAAGAGGTAATCAGGTACATGAAGGTTGCTCTTTTCTGCACACAGTCAGCAGCAAATAGAAGGCCATTGATGATACAATATTTGCCGCAACCTAGACAGATCCATAGTCCAATATCAACTACTCCCAAAAGCACATGA 2313 0.3684 MQDKLAIIDKNQTWELVERPEHRKVIGVKWMFRTKLNADGSINKHKAWLVLKGYAQIFGVYFFDTFAPVARQDTIRILLVIATQNGWKICQLDVKSAFLNGFLEEEIYVEQHEGFLMKGHGDKFYLLKKALYGLKQAPIAQYNRIDEYLSKLGLVKSLNESNLYIKVTGSNVELIQQFKDDMMQVFEMTNLGEMSYFLGMKVKQNKGDIFICQRKYAKKILKKFNMENCKGMMVQNTSRRSTLQKFNWLLNVSHNNKTKYLVCCKCTFKIDELCKTIPFESSKKGAKAFSFGSRMFSWCSKKQETVAQSTAEVEFIAATTAVNQALWLRKILTDLHLEQDTTIEVMVDNQATIIISKNPVFHGKTKYFNIKLFFLRDVQRISCFIFCYLVAMLVVDYYLGSPLLLLPVTTDLCHHILQLKAFNCLTLIYFCLRGQNSLLTIFFKNFFPFLYVYCLMFLFFCCAGYPLDNVRQFSDKELRLATDNYNPKNKIGRGGFGTVYQGTLRDGRRIAVKTLSVWSKQGVREFLTEIKTLSNVKHSNLVELIGFCIQGPSRTLVYEHVENGSLNSALLGTRNKNMKLEWRKRSAICLGIAKGLAFLHEELSPPIVHRDIKASNVLLDRDFNPKIGDFGLAKLFPDDVTHISTRIAGTTGYLAPEYALGGQLTKKADIYSFGVLILEIISGRSSARRTNGGGSHKFLLEWAWQLYEERKLLEFVDQDMEEFPEEEVIRYMKVALFCTQSAANRRPLMIQYLPQPRQIHSPISTTPKST* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2675 770 PANTHER - 476 751 - -
Gso11g2675 770 ProSiteProfiles Protein kinase domain profile. 485 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2675 770 CDD STKc_IRAK 491 749 - -
Gso11g2675 770 SUPERFAMILY DNA/RNA polymerases 10 372 IPR043502 -
Gso11g2675 770 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 11 233 IPR013103 -
Gso11g2675 770 ProSitePatterns Protein kinases ATP-binding region signature. 491 513 IPR017441 GO:0005524
Gso11g2675 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Gso11g2675 770 SUPERFAMILY Protein kinase-like (PK-like) 468 754 IPR011009 -
Gso11g2675 770 Pfam Protein kinase domain 485 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2675 770 Gene3D Transferase(Phosphotransferase) domain 1 561 760 - -
Gso11g2675 770 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 476 751 - -
Gso11g2675 770 SMART serkin_6 485 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2675 770 Gene3D Phosphorylase Kinase; domain 1 463 560 - -
Gso11g2675 770 CDD RNase_HI_RT_Ty1 288 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2675 Gso-Chr11 42712871 42723510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2675 473 749 Receptor kinase-like Gene Family AT1G56120 52.708 3.02e-91 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g2675 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2675 - - gmx:100814014 1560.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0621 15 5511709 5515676 Gso11g2675 11 42712871 42723510 GST
Gso7g1653 7 38529567 38534489 Gso11g2675 11 42712871 42723510 PCT
Gso11g2675 11 42712871 42723510 Gso7g1653 7 38529567 38534489 PCT