Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2654 ATGATCAGACACAAGCACACACACCATCTTCCATCAATTCTTCTCTCAATTCTCTTTCTTTTCAACTCAACATGTGCCATAGATTTCGTCTTCAACGGCTTCAACTCCTCTGAAGTGTTGCTCTTTGGCAACGCCACCGTCGATTCTCGAATTCTAACACTCACCCACCAGCAAAGATTCTCCGTCGGTCGTGCCTTGTACAACAAAAAAATCCCCACCAAGAAACCAAACTCTTCTCGCGTGTATCCTTTCTCCACCTCTTTCATCTTTGCCATGGCACCGTTTGAAGACACTCTTCCGGGGCACGGCTTAGTTTTCATCTTCACCCCTGTCACTGGCATCCAAGGCACAAGTTCAGCCCAACACCTTGGTCTGTTCAACCTCACCAACAACGGCAACTCAAGTAATCACGTGTTCGGTGTTGAGTTCGACGTGTTCCAGAACCAAGAGTTCGATGACATCGACGCCAACCATGTTGGGATTGACATAAACTCTCTTAAATCTTATGTTTCCCATGATGCTGGATATTGGCCAGATGGCGCTGACAAATCCTTTAAGGAGTTGACGCTTAACAGTGGTGAGAATTACCAAGTTTGGATTGACTATGAAGATTCTTGGATTAATGTTACCATGGCACCGGTGGGTATGAAAAGGCCTAGTAGGCCTTTGTTGAATGTTTCTCTCAACTTATCTCAGGTTTTTGAGGATGAAATGTTTGTTGGGTTTACTAGTGCCACTGGCCAATTAGTTGAGAGTCATAAGATTTTGGGGTGGAGTTTCAGTAATGAGAAATTTTCATTAAGTGATGAACTTATTACTACCGGGTTACCATCTTTTGTTCTTCCAAAAGATTCAATTTTTAAGTCCAAGGGGTTTGTTGCAGGGTTTACTGTTGGAGTTTTCTTTGTTATTTGTCTCCTTGTTTTGTTGGCACTGTTTTTGATTCAGAGAAAGCGTGAGAAAGAAAGGAAGAGGATGGAAATGGAAGACTGGGAGTTGGAGTATTGGCCACACAGAATGACATATGAAGAAATTGAGGCAGCAACAAAGGGGTTCTCTGAGGAGAATGTGATTGGGGTTGGTGGGAATGGGAAAGTCTACAAGGGTGTTCTACGAGGAGGGGTGGAGGTTGCTGTGAAGCGCATTTCTCATGAAAATGATGGTTTGCGAGAGTTTCTTGCTGAAGTTTCAAGTCTTGGGAGACTGAAGCAAAGGAATCTGGTGGGGTTGAGAGGTTGGTGCAAGAAAGATGTTGGGAATTTCTTGTTAATTTATGACTACATGGAAAATGGGAGCTTGGACAAGAGGGTGTTTGATTGTGATGAGAGCAAGATGTTAAGTTATGAAGACAGGATAAGGATTCTAAAAGATGTGGCTTTTGCAGTGTTGTACTTGCATGAGGGGTGGGAAGATAAGGTTGTGCACAGGGACATCAAGGCCAGTAATGTTCTACTTGATAAGGATATGAATGGAAGGCTCGGAGATTTTGGGTTAGCCAGAATGCATAGCCATGGTCAAGTTGCTAGCACCACAAAATTGGTTGGAACAGTGGGGTACATGGCCCCTGAAGTTTTTAAGACTGGAAGAGCTTCCACTCAGACAGATGTTTACATGTTTGGAATCTTGATTTTGGAGGTCTTGTGTGGAAGGAGACCTTTAGAAGAAGGTAAGCCACCTTTGGTGGAGTGGATTTGGCAACTAATGGTACAAGGGCAAGTTGAGTGTGCACTGGATGAAAGGCTAAGGGCTAAGGGAGAGTTCAATGTGCAAGAAATGGAGAGGGTAATGCACTTGGGTTTGTTGTGTGCCTACCCTGAACCAAAGACCAGACCCACAATGAGACAAGTGGTGAATGTTTTAGAGGGGAAGAATGAGGTAGAGGACTCAGAAATTGAGAATATGGATACCTATTTGCTCCAACAGTTAAAATCAAGGGACATATTGTCTGAATATTCTCAGTATTTTAGCTATACGTCACACCCAACTTTCCAAGATATTCGTCTCTCTTCCTCAATGTCTCTTACATGGTCCGAATCTGTAGTTGAGGGTAGGTGA 2055 0.435 MIRHKHTHHLPSILLSILFLFNSTCAIDFVFNGFNSSEVLLFGNATVDSRILTLTHQQRFSVGRALYNKKIPTKKPNSSRVYPFSTSFIFAMAPFEDTLPGHGLVFIFTPVTGIQGTSSAQHLGLFNLTNNGNSSNHVFGVEFDVFQNQEFDDIDANHVGIDINSLKSYVSHDAGYWPDGADKSFKELTLNSGENYQVWIDYEDSWINVTMAPVGMKRPSRPLLNVSLNLSQVFEDEMFVGFTSATGQLVESHKILGWSFSNEKFSLSDELITTGLPSFVLPKDSIFKSKGFVAGFTVGVFFVICLLVLLALFLIQRKREKERKRMEMEDWELEYWPHRMTYEEIEAATKGFSEENVIGVGGNGKVYKGVLRGGVEVAVKRISHENDGLREFLAEVSSLGRLKQRNLVGLRGWCKKDVGNFLLIYDYMENGSLDKRVFDCDESKMLSYEDRIRILKDVAFAVLYLHEGWEDKVVHRDIKASNVLLDKDMNGRLGDFGLARMHSHGQVASTTKLVGTVGYMAPEVFKTGRASTQTDVYMFGILILEVLCGRRPLEEGKPPLVEWIWQLMVQGQVECALDERLRAKGEFNVQEMERVMHLGLLCAYPEPKTRPTMRQVVNVLEGKNEVEDSEIENMDTYLLQQLKSRDILSEYSQYFSYTSHPTFQDIRLSSSMSLTWSESVVEGR* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2654 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Gso11g2654 684 CDD STKc_IRAK 358 622 - -
Gso11g2654 684 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Gso11g2654 684 SMART serkin_6 352 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2654 684 ProSiteProfiles Protein kinase domain profile. 352 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2654 684 Gene3D Phosphorylase Kinase; domain 1 313 427 - -
Gso11g2654 684 Gene3D - 25 270 - -
Gso11g2654 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 268 IPR013320 -
Gso11g2654 684 Coils Coil 314 334 - -
Gso11g2654 684 Gene3D Transferase(Phosphotransferase) domain 1 428 645 - -
Gso11g2654 684 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 8 675 - -
Gso11g2654 684 SUPERFAMILY Protein kinase-like (PK-like) 331 622 IPR011009 -
Gso11g2654 684 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Gso11g2654 684 Pfam Protein kinase domain 353 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2654 684 PANTHER - 8 675 - -
Gso11g2654 684 Pfam Legume lectin domain 27 264 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2654 Gso-Chr11 42492738 42495362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2654 22 568 Receptor kinase-like Gene Family AT4G04960 68.478 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso11g2654 Pkinase 2.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2654 - - gmx:100804391 1300.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0642 15 5715239 5717755 Gso11g2654 11 42492738 42495362 GST