Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2651 ATGGGGGAAGATGGTTATTCTTGGATTAGGAGGACAAAATTTTCACACACTGTCTGCCATCGTTTGGATCCTGCTAGGTTAGGCTCTATTCCTATCAGTGTTCAGTCAGAGCAAAAATCAAGGCCTGCTGCCTCAAAGGCTCAGAGACACCCCATAACAAACAAGCAGAGATCTTTGTCACCATTGCCTGAGACTTATCTTTCTGAGGCCTTCAGGGAAGCTAGACATGAACAGAAGAGGTTCTCCACGCCGAATCCCCGGAGGGAAAAGAGGATTATGGGGAAGTTGTTGAACAAAGATTCTAGGGAGACTAAGGAATCAAGTTCAAAGTCACCTTCGCATAGTCCAAATAGGCAAGTGAAGTCAAAGAACCGCAAGGATTCAGCATGGACTAAGCTTTTGGACAATGGTGGAGGAAAGATTACTGCTGTGGAAACAGCTGAAGAGTGGAATGTTGACATGTCTCAATTGTTTTTTGGCCTAAAGTTTGCTCATGGTGCACATAGTCGACTTTACCATGGTGTATATAAGGAGGAGGCTGTTGCTGTTAAAATCATTATGGTACCTGAGGATGATGAAAATGGAGCTTTGGCTTCTCGATTAGAGAAACAGTTCATTAGAGAAGTCACCCTTTTATCTCGTCTTCACCATCAAAATGTCATAAAGTTCTCAGCAGCATGCAGAAAGCCACCGGTTTATTGTATTATCACAGAATATCTGGCGGAAGGTTCCTTGAGGGCATATTTGCATAAATTGGAACACCAAACTGTTTCTCTACAAAAGCTAATAGCTTTTGCTCTGGATATTGCTCGCGGAATGGAATATATACATTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTCCTAATCAACGAAGACAATCACCTTAAAATTGCCGATTTTGGCATTGCATGTGAGGAAGCATCTTGTGACTTATTGGCTGATGACCCTGGCACCTACCGTTGGATGGCACCTGAGATGATCAAAAGGAAATCCTATGGGAAAAAGGTTGATGTCTACAGTTTTGGGCTTATGATATGGGAGATGTTGACTGGAACGATACCATATGAGGATATGAATCCAATACAGGCTGCTTTTGCAGTAGTAAATAAGAATTCAAGGCCGGTTATTCCATCAAACTGCCCTCCTGCGATGCGAGCTTTAATTGAGCAATGTTGGAGCTTGCAACCAGACAAGAGGCCTGAGTTCTGGCAGGTTGTGAAGATATTAGAGCAATTTGAATCTTCACTTGCCAGTGATGGAACCCTGAGCCTGGTGCCAAATCCTTGTTGGGATCATAAGAAAGGGCTTCTTCATTGGATTCAAAAGCTTGGTCCCTTGCACCAAAATAGTGGCCCTGTGCCTAAACCCAAATTCACATGA 1392 0.4325 MGEDGYSWIRRTKFSHTVCHRLDPARLGSIPISVQSEQKSRPAASKAQRHPITNKQRSLSPLPETYLSEAFREARHEQKRFSTPNPRREKRIMGKLLNKDSRETKESSSKSPSHSPNRQVKSKNRKDSAWTKLLDNGGGKITAVETAEEWNVDMSQLFFGLKFAHGAHSRLYHGVYKEEAVAVKIIMVPEDDENGALASRLEKQFIREVTLLSRLHHQNVIKFSAACRKPPVYCIITEYLAEGSLRAYLHKLEHQTVSLQKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDNHLKIADFGIACEEASCDLLADDPGTYRWMAPEMIKRKSYGKKVDVYSFGLMIWEMLTGTIPYEDMNPIQAAFAVVNKNSRPVIPSNCPPAMRALIEQCWSLQPDKRPEFWQVVKILEQFESSLASDGTLSLVPNPCWDHKKGLLHWIQKLGPLHQNSGPVPKPKFT* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2651 463 Gene3D Transferase(Phosphotransferase) domain 1 241 427 - -
Gso11g2651 463 SUPERFAMILY Protein kinase-like (PK-like) 144 413 IPR011009 -
Gso11g2651 463 CDD STKc_MAP3K-like 164 413 - -
Gso11g2651 463 MobiDBLite consensus disorder prediction 30 132 - -
Gso11g2651 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Gso11g2651 463 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Gso11g2651 463 PRINTS Tyrosine kinase catalytic domain signature 237 250 IPR001245 GO:0004672|GO:0006468
Gso11g2651 463 PRINTS Tyrosine kinase catalytic domain signature 275 293 IPR001245 GO:0004672|GO:0006468
Gso11g2651 463 PRINTS Tyrosine kinase catalytic domain signature 321 331 IPR001245 GO:0004672|GO:0006468
Gso11g2651 463 PRINTS Tyrosine kinase catalytic domain signature 340 362 IPR001245 GO:0004672|GO:0006468
Gso11g2651 463 PRINTS Tyrosine kinase catalytic domain signature 384 406 IPR001245 GO:0004672|GO:0006468
Gso11g2651 463 SMART serkin_6 157 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2651 463 Pfam Protein tyrosine and serine/threonine kinase 162 413 IPR001245 GO:0004672|GO:0006468
Gso11g2651 463 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 440 - -
Gso11g2651 463 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 440 - -
Gso11g2651 463 ProSiteProfiles Protein kinase domain profile. 157 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2651 463 MobiDBLite consensus disorder prediction 69 109 - -
Gso11g2651 463 MobiDBLite consensus disorder prediction 31 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2651 Gso-Chr11 42468977 42472620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2651 1 463 MAP Kinase Kinase Kinase AT5G58950 55.513 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso11g2651 PK_Tyr_Ser-Thr 5.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2651 - - gmx:100500590 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0645 15 5741303 5744969 Gso11g2651 11 42468977 42472620 GST
Gso7g1673 7 38730604 38735107 Gso11g2651 11 42468977 42472620 PCT
Gso11g2651 11 42468977 42472620 Gso7g1673 7 38730604 38735107 PCT