Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2649 ATGGGAAAAGCATTCGACATCGGAGCCGTTCCGTTCAACGCCGAGGGGTGGGGTCCGCCGGACAGCACCATCACCGGCAGCAACATCAACCTCCCTCTGAACGTCCCCTTCGCCCCCTTCTCCCGCTCCGACAAATTGGGCCGCATCGCCGACTGGACCCGCAACTTCAACAACCCGACCCGCTCCAAGAACCCCGCTGACGCCGTCTTTGACTTCACGAACGACGACGACGACGACACCTTCCGCCTCGTCGACCCCAAGCCCCCGCCGCGCCCCAAATTTGGTCCCAAGTGGCGCTTCCCGCAGCAGCGCCAGCTCCCTCAGCGCCGCGACGAAGAAGTCGAGGCGAAGAAGCGCGAGCAGGAGAAGGAACGCGCCCGCCGAGATCGTCTCTACCACATGAACCGCTCAAACCCTAATCAGCAGCGCCGTGAAGCCGCTGTTTTCAAATCCTCCGTCGATATCCAACCCGAATGGAACATGCACGACCAGATCCCCTTCAGCACCTTCTCCAAGCTCTCCTTCACCGTTCCCGAACCCGAAGACCTTCTCCTCTGCGGCGCTCTGGAATACTACGACCGCACTTACGATCGCATCACGCCCAAAAACGAACGCCGCCTCGAACGCTTCAAGAATCGAAACTTCTTCAAAGTCACCACCACCGACGACCCCATCATTCGCAGACTCGCCAACGAGGACAAGGCCACCGTTTTCGCCACCGACACGATTCTGTCCACTCTCATGTGTGCCCCTCGTTCTGTTTATTCCTGGGACATTGTCGTCCAGCGTGTCGGAAACAAGCTTTTCTTTGATAAGCGCGATGGGTCGCAGCTCGATTTGCTCTCTGTTCATGAAACCTCGCAGGAGCCATTGCCTGAGTCGAAGGATGATATTAACTCTGCCCATTCGTTGAGCGTTGAGGCTGCTTATATCAACCAGAATTTCTCTCAGCAGGTGCTTATTAGGGATGGGAATAAGGTTACTTTTGATGAGGCTAACCCTTTTGCTAATGAAGGTGAGGAGGTTGCTTCTGTCGCTTATAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCGAGGTGTGAGGTTCATAGTGTTGTTGACGTGAACAAGCAGAGGTCGTTCCTTACTTTGAATGCGTTGAATGAGTTTGATCCCAAGTATTCGGGTGTGGACTGGAGGCAGAAGTTGGAGACTCAGAGGGGTGCTGTGTTGGCCACTGAGCTTAAGAACAATGCAAATAAGTTGGCTAAGTGGACTGCTCAGGCTCTTTTGGCGAGCGCGGATACGATGAAGTTGGGGTATGTGTCGAGGATTCATCCCCGTGATCATTTCAATCATGTGATTTTGGCTGTGGTTGGATATAAACCCAGGGACTTTGCGGCACAGATTAATTTGAACACGACGAATATGTGGGGGATTGTGAAGTCTATTGTGGATTTGTGCATGAAATTGAATGAGGGGAAGTATGTTCTTGTGAAAGATCCATCTAAGCCCCAGGTTAGGATTTACGAGGTTCCTGCGGATGCTTTTGAAAATGACTACGTGGAGGAGCCACTTCCGGAGGATGAACAAGTTCAGCCTCCATCAGAGGGTGCTGAGGGGGGAGAGGCAACTACTACAACTAATGACGTGGAAGATAAGCAGATAGATGGTCAAGCTTAA 1674 0.5269 MGKAFDIGAVPFNAEGWGPPDSTITGSNINLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPADAVFDFTNDDDDDTFRLVDPKPPPRPKFGPKWRFPQQRQLPQRRDEEVEAKKREQEKERARRDRLYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPIIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPESKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPSEGAEGGEATTTTNDVEDKQIDGQA* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2649 557 MobiDBLite consensus disorder prediction 537 557 - -
Gso11g2649 557 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 8 508 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gso11g2649 557 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 520 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gso11g2649 557 MobiDBLite consensus disorder prediction 517 557 - -
Gso11g2649 557 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 3 556 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gso11g2649 557 MobiDBLite consensus disorder prediction 56 128 - -
Gso11g2649 557 PIRSF Transl_init_eIF3d 1 538 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gso11g2649 557 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 3 556 - -
Gso11g2649 557 Coils Coil 109 129 - -
Gso11g2649 557 MobiDBLite consensus disorder prediction 104 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2649 Gso-Chr11 42444054 42449110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2649 3 554 Eukaryotic Initiation Factors Gene Family AT4G20980 77.645 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2649 K03251 - gmx:100802805 1060.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0647 15 5758632 5761891 Gso11g2649 11 42444054 42449110 GST