Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2635 ATGTCGCTCCCCGATTCTCCCGTCGCCAACGATGACGAAATCGATCCATCGCTTGACGAAGAAGAAGAAGAAGAAGAAGAAGAAATAGAGGAGGAGGAAGAGGAGGAGGAAGAAGTGGAGGAGGAAGAGGTAGAAGGAGAAGAAGTAGAAGAAGACGAGGTTGATGAAGAAGAGGAAGAGGAAGAGGAAGTGGTCGAGGAAGAAGTAGAAGAGGAAGAGGAAGAGGAAGAGGAAGTGGTCGAGGAAGAAGTAGAAGAGGAAGAGGAAGAGGAAGAATTAGAAGAGATAGAGGTGGAGGAAGAAGAAGAGGAGAGCGAACAACGAGCAGAAGAAATGGAGGAGGAAGAGGAAGAAGAAGTCGAAGTGGAAGAGGAGGGGGAGGAAGAAGAAGTCGAAGAGGAGGAGGAGGGGGAGGAAGAAGAAGTCGAAGAGGAGGAGGAGGAAGAAGAAGTCGAAGTCGAGGAGGAGGAGGAGGAGGAAGAAGAAGTCGAAGTCGAAGAGAAGGAGGAGAAAGAAGATGAGGAACAACAACAACAACAGCAAGAGACAGTGGAGGAGAAGAAGGAAGAGCGACAACAGCAACAAGAAGCAGAAGAAGCAGTGAAGGAACAACAAAAAAAACAACAACAAGAAGCAATGGAGGAGAAGGAGGAGGACAAATTGGCGGTGCCAGGTTCTCCACTCGATGCCGATAAGGATCGCCAAGATTCGAGCCAACATATGGAGTTTGAGGGGCAAGACAAAATCTTGGGACCAGTTTCTTCTGTGGCTGAAAACCCTGAAGTGATGCCACCATCTAGTATGCATTGCTTGGAAGAGAATGATGCCATGCTAAAAAAAAGTGAGATACCTACATTGGAAAAGGACGAGCTTCCCCTGAAATATGAATTTTCGAGCCATCCAAAATCAAGAGAAAATCTGACTTCTGTTGAAGATTACAGAAGTCAAGTATTCGATGTTGAAGTTGAAAATGCTGGATCGCTTCTGCAGAATGAAACATTTGGAGGATACAGTGAGCCAGGTTGCAATAGCAAAGCTAATTTATGTGGTGATAATAATATTGATTCCAGGGCCAGGGCCACCAAGTCATCTAGTGATACTGTACAAGATATGGTTATTGGCCCCCTACCAAGAGATTGCCTTGTTGAAGATTCTAATGGTGGTCAGAATTCTAGAATCAAAATCATGCAGTCGGAGATAGAGTCAAGGGATAATGTGAAACAAATGACATCAAGGACTAGAAGTCTGTCTCCTGGTGCTGAGATTAAAGATGGAAACAAACGCCCCAGAATTATATGTGATTTTTTTGCTAAAGGATGGTGTATCAGAGGTAGTTCTTGTAGCTTTCTTCATATAAAAGATACTGGGGCCAATATTGACCAGGAGGCTGAAGCAGACTTAGTTACTACTCATCAGAAGAGACAGTTGAAAGTGGAAGAAGGTGTTAGGGAAAATGTTGAGAGATCAAGGATGAATCAGCAAGAAACAACTCCTAGTTGGCATCCATCTCAAGAAAAACAGAAGTTTCCGCTGAGGGACAACTTGGTTCCAGAGAATAGATTTCCATTTAGTGCATCAGACAACTATTTTAGCTCAAATCTTTCTTTGACTTCAACTCGTGCAGATGGAATGGCTACTCTTAGGAACCAACATATGTACAAAGGATATACTTCCACACTTTTGAGCCATTCACCAAATTCGAGCCTGGTTTCTCAATTTCCAGCTTCAAGTATGCCACTCTCCCAGCAGATTCTAGCCCAATCAGGACGTTCACTGTCTTTTAGTAATGTGGATTCTAAAAAATTTTTGAACACTGACAAAGAATATCTCACATCTAAGTCCACTTTCTCTGGTTCTGGTTCTGGTTCAGGGCGGGAAGATTTTTCTCTTGTTAATTTGTCTAGGGTTCCATCATATCCTGCTGGATATAAATCAAAAATCTGTTCTTATGATTGGGAACCTTCTGTGCCCTTTCGACCATCTTTTTTTATTACTTCTATGAATGTATCATCTCCTGGAGATCTTTATGACCCTCTTCGTGATAGCATTGAAATACCTAATATAGGAGATGGGTCTTTGAAGGCTTCCCTTTTAATTCATGGATCAAATATACAGGCATCATCACAGGTTCGGACATATGGTGATTCTGCTGTAGTTGGGAAACACATGGCCAATCTTAATGATGACAAAAGTTCTGTATCATCTCATAATAAATTTTGTGAAAATGAGCCAAATAAAAATTGTCTTCCTCGTGAAAAAGATTGTCTTCCACCTGAAACAGAGATAACATCAGGAACTTATGTACACTATCAAGGTAAAATGGGCATGGGGCAACATACCTTTGAGGTTGCAGATAATAAAAAAAAAGAGAGAGATTTGACTGAGTGTGATGCTAGATGTCATGGTGAAGGATCAGGGCGTAAAAAGAAGAGAGTAGACAGGGATAAGAAAAATCATGAAATGGATGTCGACTTTCAGATGGATGGCAGCATGCAGAAGGAATCGAAGGCACTGAAATTTTTCCGCGCGGTTCTTATTGATCATGTTAAAGAGTTGTTAAAACCAGCTTGGCACGAGGGTCGTCTTAGCAAGGACACACATATAATGATAGTCAAAAAATCAGTTGACAAGGTTGTTAACACCTTGGAACCCCATCAGATTCCGACCATAGATACTGCTAAGCAATATGTTTCTTCAAGTCAGGTGAAAATTGCAAAGCTGGTTAATGGATATGTCAATAAATATGGAAAATCTTGA 2757 0.4178 MSLPDSPVANDDEIDPSLDEEEEEEEEEIEEEEEEEEEVEEEEVEGEEVEEDEVDEEEEEEEEVVEEEVEEEEEEEEEVVEEEVEEEEEEEELEEIEVEEEEEESEQRAEEMEEEEEEEVEVEEEGEEEEVEEEEEGEEEEVEEEEEEEEVEVEEEEEEEEEVEVEEKEEKEDEEQQQQQQETVEEKKEERQQQQEAEEAVKEQQKKQQQEAMEEKEEDKLAVPGSPLDADKDRQDSSQHMEFEGQDKILGPVSSVAENPEVMPPSSMHCLEENDAMLKKSEIPTLEKDELPLKYEFSSHPKSRENLTSVEDYRSQVFDVEVENAGSLLQNETFGGYSEPGCNSKANLCGDNNIDSRARATKSSSDTVQDMVIGPLPRDCLVEDSNGGQNSRIKIMQSEIESRDNVKQMTSRTRSLSPGAEIKDGNKRPRIICDFFAKGWCIRGSSCSFLHIKDTGANIDQEAEADLVTTHQKRQLKVEEGVRENVERSRMNQQETTPSWHPSQEKQKFPLRDNLVPENRFPFSASDNYFSSNLSLTSTRADGMATLRNQHMYKGYTSTLLSHSPNSSLVSQFPASSMPLSQQILAQSGRSLSFSNVDSKKFLNTDKEYLTSKSTFSGSGSGSGREDFSLVNLSRVPSYPAGYKSKICSYDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSIEIPNIGDGSLKASLLIHGSNIQASSQVRTYGDSAVVGKHMANLNDDKSSVSSHNKFCENEPNKNCLPREKDCLPPETEITSGTYVHYQGKMGMGQHTFEVADNKKKERDLTECDARCHGEGSGRKKKRVDRDKKNHEMDVDFQMDGSMQKESKALKFFRAVLIDHVKELLKPAWHEGRLSKDTHIMIVKKSVDKVVNTLEPHQIPTIDTAKQYVSSSQVKIAKLVNGYVNKYGKS* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2635 918 SMART c3hfinal6 428 453 IPR000571 GO:0046872
Gso11g2635 918 Coils Coil 15 222 - -
Gso11g2635 918 MobiDBLite consensus disorder prediction 402 423 - -
Gso11g2635 918 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 432 451 IPR000571 GO:0046872
Gso11g2635 918 MobiDBLite consensus disorder prediction 482 508 - -
Gso11g2635 918 SUPERFAMILY CCCH zinc finger 427 451 IPR036855 GO:0046872
Gso11g2635 918 MobiDBLite consensus disorder prediction 174 243 - -
Gso11g2635 918 MobiDBLite consensus disorder prediction 12 173 - -
Gso11g2635 918 ProSiteProfiles Zinc finger C3H1-type profile. 427 454 IPR000571 GO:0046872
Gso11g2635 918 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 207 918 - -
Gso11g2635 918 MobiDBLite consensus disorder prediction 1 268 - -
Gso11g2635 918 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 207 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2635 Gso-Chr11 42314840 42321808 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gso11g2635 zf-CCCH 5.9e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2635 - - gmx:100780664 1396.33