Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso11g2632 | ATGGCGCCGAGGGATCATAAGACAAGCAACGCTAAGGCTAACGGTAACGGTAACAGCGGGGTGAAGGAGGTGCATTTTCGTGGAGTGAGAAAGAGGCCGTGGGGGAGATACGCCGCGGAGATCAGAGATCCCGGCAAGAAGAGCCGCGTCTGGCTCGGAACCTTCGACACGGCGGAGGAGGCAGCGCGTGCCTACGACGCCGCAGCACGAGAGTTTCGCGGCCCTAAGGCCAAGACAAACTTCCCTCTCCCTTTGGAAAATGTTAAGAACTCGAGCCCCAGCCAGAGCAGCACCGTCGAGTCCTCCAGCCGCGACCGCGACGTCGCCGCCGATTCCTCGCCTCTAGACCTCAACCTCGCCCCCGCCGCCGTCGCATCCGCTCGATTCCCCTTCCAGCACCAGTTCCCGGTTTTTACCGGCGCGGTGCCTGCGGCAAATCAGGTTTTGTACTTCGACGCTGTCCTACGCGCCGGCATGGCCGGTCCACGTGGCTTTGCGTTTGGCTACAATCATCATCCCGTTGCGGCGAGTGAGTTCCACGCGACGACGAGCGACTCGGACTCTTCCTCTGTTATCGATCTGAACCATAATGAAGGCGAGGTTAAGGGGAACGGTTCTAGAATCTTCGATCTGGACCTTAACCATCCTCCTCCGCATGAGATCGCTTGA | 669 | 0.5964 | MAPRDHKTSNAKANGNGNSGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAREFRGPKAKTNFPLPLENVKNSSPSQSSTVESSSRDRDVAADSSPLDLNLAPAAVASARFPFQHQFPVFTGAVPAANQVLYFDAVLRAGMAGPRGFAFGYNHHPVAASEFHATTSDSDSSSVIDLNHNEGEVKGNGSRIFDLDLNHPPPHEIA* | 223 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso11g2632 | 222 | MobiDBLite | consensus disorder prediction | 78 | 110 | - | - | |
Gso11g2632 | 222 | SMART | rav1_2 | 25 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Gso11g2632 | 222 | Pfam | AP2 domain | 25 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Gso11g2632 | 222 | Gene3D | AP2/ERF domain | 24 | 83 | IPR036955 | GO:0003700|GO:0006355 | |
Gso11g2632 | 222 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 1 | 202 | - | - | |
Gso11g2632 | 222 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Gso11g2632 | 222 | CDD | AP2 | 25 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Gso11g2632 | 222 | PRINTS | Ethylene responsive element binding protein signature | 26 | 37 | IPR001471 | GO:0003700|GO:0006355 | |
Gso11g2632 | 222 | PRINTS | Ethylene responsive element binding protein signature | 48 | 64 | IPR001471 | GO:0003700|GO:0006355 | |
Gso11g2632 | 222 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE | 1 | 202 | - | - | |
Gso11g2632 | 222 | ProSiteProfiles | AP2/ERF domain profile. | 25 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Gso11g2632 | 222 | MobiDBLite | consensus disorder prediction | 84 | 103 | - | - | |
Gso11g2632 | 222 | SUPERFAMILY | DNA-binding domain | 25 | 83 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso11g2632 | Gso-Chr11 | 42275715 | 42276877 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso11g2632 | 1 | 137 | AP2-EREBP Transcription Factor Family | AT5G44210 | 50.617 | 4.73e-40 | 134 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Gso11g2632 | AP2 | 1.2e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso11g2632 | K09286 | - | gmx:100170742 | 412.535 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso15g0661 | 15 | 5933616 | 5934726 | Gso11g2632 | 11 | 42275715 | 42276877 | GST |