Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2600 ATGTCTAAAGACAAAGATGGTGAGGAGCCACTTGGTATAGGCCTTCAGGTGATGCTAGCAGCAGCTTTCTCATTATTTGGTATGATCTTATTAATCATCATCTTCCATTTTTGTGTAAAATATTTCATTAGACGCCAACAAAGGAGACGCCAAAACGACCTTCTTTATCAAATCAGCACTCAAATTGCACCAATTGATGTGAGTTCTGTGGAGCCACGCAACTCTGGCCTTGACCCTTTGATCATAGCTTCCCTGCCTAAGCTCTTGTACAAGCAAACGGACCAATTCAAGCAAGGTGAAGAAGTTGTAGAGTGCTCGGTTTGCTTAGGCACTATTGTGGAAGATACAATCAGTAGGGTGTTACCAAATTGTAAGCACATTTTTCATGTTGATTGTGTTGATAAATGGTTTAATTCTAACACCACATGCCCAATTTGCCGCACCGTGGTTGACCCAAAGGTGCAACCAGAACATGGTCATTTAGGTGCCACACGGCTTCACAACCAAGTCCAACCCACAGCACCACCAGCTGAGGGTGGTGATGAGCTACCAGATGGTAATGAATTGGAGAGGGTGGGATGTTCAGGTTTGAGAATAGGATCTTTTCATAGGATGGTTAGTAACAGGGAAAGATCCGGGAGAAGGACTCAGAGCTGTGATGGATCTACCATAGTAGATATAGAAAGACACTAA 693 0.4343 MSKDKDGEEPLGIGLQVMLAAAFSLFGMILLIIIFHFCVKYFIRRQQRRRQNDLLYQISTQIAPIDVSSVEPRNSGLDPLIIASLPKLLYKQTDQFKQGEEVVECSVCLGTIVEDTISRVLPNCKHIFHVDCVDKWFNSNTTCPICRTVVDPKVQPEHGHLGATRLHNQVQPTAPPAEGGDELPDGNELERVGCSGLRIGSFHRMVSNRERSGRRTQSCDGSTIVDIERH* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2600 230 MobiDBLite consensus disorder prediction 161 186 - -
Gso11g2600 230 PANTHER RING FINGER DOMAIN-CONTAINING 2 230 - -
Gso11g2600 230 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 2 230 - -
Gso11g2600 230 MobiDBLite consensus disorder prediction 207 230 - -
Gso11g2600 230 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Gso11g2600 230 SMART ring_2 105 146 IPR001841 -
Gso11g2600 230 CDD RING-H2_EL5_like 104 147 - -
Gso11g2600 230 Pfam Ring finger domain 104 147 IPR001841 -
Gso11g2600 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 153 IPR013083 -
Gso11g2600 230 SUPERFAMILY RING/U-box 85 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2600 Gso-Chr11 41976174 41976866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2600 13 230 C3H Transcription Factor Family AT2G42360 33.043 1.15e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2600 K19038 - gmx:100786701 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0683 15 6135811 6136910 Gso11g2600 11 41976174 41976866 GST