Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2595 ATGCAAAGGATCAAAACCTCAGAACGCACTTTGATCTTCCCTTCCCACCCTCCTTTTCTCCAAGACCACCCCTTCCCTCTCTCCCACCTCGACACTGATCCCAACCTCCACCTCACCTTCCGCTACCTCCGCGCGTACACCTCAACAACAACAACAACCTCCCTCGACCCCTTCCACGTCATCTCCTCCTCCCTCTCCCACGCCCTCCCCCACTTCTACCCCCTCACCGCCACCCTCCGCCGCCAACAAACCTCCCCCCACCGCCTCCAACTCTGGTGCGTCGCCGGCCAGGGCATCCCCCTCATCCGCGCCACCGCGGACTTCACCCTCGAGTCCGTGAACTTCCTCGACAACCCGGCCTCGAGCTTCTTGGAGCAGTTAGTGCCCGACCCGGGACCCGAGGAGGGGATGGAGCACCCGTGCATGCTCCAGGTGACGGTGTTCGCGTGCGGGGGATTCACCCTCGGCGCGGCGATGCACCACGCGCTCTGCGACGGCATGGGCGGGACGCTGTTCTTCAATGCGGTGGCGGAGCTGGCGCGTGGGGCGACCCGGATAACGTTGGACCCGGTTTGGGACCGTGCGAGGTTGCTGGGTCCCAGGGACCCGCCCCTGGTGGATTCGCCGTTGATTGGGGAGTTTCTGCGTTTGGAGAAGGGAGTTTTGCCGTACCAACAGAGTGTTGGTGGGGTCGCGAGAGAGTGCTTTCACGTGAAGGATGAGTGCTTGGACAATTTCAAGAGGACCTTGTTGGAGCAATCTGGGTTGAACTTCACCGTTTTTGAGGCTCTTGGTGCCTACATCTGGAGGGCTAAGGTCAGGGCCTCGGGAATCCAGGCTGATGAAAAGGTGAAGTTTGCATACTCAATTAACATACGGAGACTGGTAAAGCCACCACTGCCTGGTGGCTATTGGGGTAATGGTTGTGTGCCAATGTACGTACAACTTAGTGCCAAAGATTTGATAGAGAAACCCGTTTGCGAAACCGCAGAGCTAATAAAAAAGAGTAAAAGCAATGTCACTGATGAGTATGTTAAGTCCTACATCGATTATCAGGAGCTGCATTTTGCTGATGGAATCACTGCGGGAAAAGAGGTTAGTGGGTTCACGGATTGGAGGCACTTGGGCCATTCAACTGTGGACTTTGGGTGGGGTGGCCCAGTTACTGTTTTGCCCCTTGGAAGGAACTTACTTGGGAGTGTTGAGCCTTGCTTTTTTTTGCCTTATTCAACAGCCACTTCAGAGAAGAAAGAGGGGTTCAAGGTTTTGGTGACTTTGAGAGAGGCTGCGTTGCCTGCTTTCAGAGAAGACATGAAAGTGTTTTGCAATAGCCAAGAGCAGTGGCTGAGCCACATATAG 1359 0.5563 MQRIKTSERTLIFPSHPPFLQDHPFPLSHLDTDPNLHLTFRYLRAYTSTTTTTSLDPFHVISSSLSHALPHFYPLTATLRRQQTSPHRLQLWCVAGQGIPLIRATADFTLESVNFLDNPASSFLEQLVPDPGPEEGMEHPCMLQVTVFACGGFTLGAAMHHALCDGMGGTLFFNAVAELARGATRITLDPVWDRARLLGPRDPPLVDSPLIGEFLRLEKGVLPYQQSVGGVARECFHVKDECLDNFKRTLLEQSGLNFTVFEALGAYIWRAKVRASGIQADEKVKFAYSINIRRLVKPPLPGGYWGNGCVPMYVQLSAKDLIEKPVCETAELIKKSKSNVTDEYVKSYIDYQELHFADGITAGKEVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTATSEKKEGFKVLVTLREAALPAFREDMKVFCNSQEQWLSHI* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2595 452 Gene3D - 225 437 IPR023213 -
Gso11g2595 452 Pfam Transferase family 4 439 - -
Gso11g2595 452 PANTHER ACYL TRANSFERASE 4 3 443 - -
Gso11g2595 452 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 3 443 - -
Gso11g2595 452 Gene3D - 2 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2595 Gso-Chr11 41952904 41955800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2595 34 394 Monolignol Biosynthesis Gene Families AT5G48930 28.800 1.20e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2595 - - gmx:100817021 915.99