Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2579 ATGTGCCCTGTGCTCCCCCTGTACTTTAAAGTTCACGGAGCTCTTCAAATAGTTTCATTGATTCGTTTTCTCTCCCTTCTCCCTCTGGTCTCTCTCTGTCTCCAAAGTCAGAAACAGAAACTAAAATTGTATAAGAACCAAACCCCAAACACTCACTTTTCCAAAATTTCAATATCTTGCTTTGTTTTCTCCTTCCTCTCAAGCATGTCTACTCCTTCATCATCATCATCTTCTTCTTCTATTTGGGTGTTGTCTAACATAAAACTTCAGTTCTTTGGCCGCATCAGAAGGTTTCTCCAATCCAAAGCAACCAAAAAGCGTTATGACCCCTCTGATCGGTTTGACACAGCTAAGAGCAAAGTTGAACACAACAACAAGGTTGAAAATCTTGAAACGGTTCAAGTTATGGAGAAGCATAAAGAGGAGGAGGAAGAGTCTGTGATCATGTTGCAGAGAACTGTGAAGATGCTTCACTTTGGAAGCTGGGAAGAGAAGGAGGTGGCAGCAAAGGAGATTGAAAAGTTAGCCAAGGAAGATGTTAAGGTTAGAAAATTGATAACAGAACTTGGGGTGGTGCCGGTGTTGGTATCTATGGTGGCGTCGCCGGTGGCTAGCCGCCGGCGAGCAGGGTTGACGGCGTTGATCCACCTAGCTGATGGAACCTACACGAACAAGGCTTTGATAGTGGAGGCAGGAATATTGTCCAAGCTTCCTAAGACAATTGACCTTGTAGATGAATCAACAACAAGTAAATTGGTAGAGTTGCTTTTGTCATTGTCATCTCTAGCAAACACTCAATTCCCTCTTGCCATATTAGACTTTCTACCGTTACTTAGAAACATTCTTGAGAAAGGCTCAAGTTTTGACACCAAAAATTCATGTTTAGGTGCCTTACATAACCTATCAACTGTGTTAGAGAATGCATGCCCTTTGGTTTCAAGTGGGGTGGTCCCTATCCTCTTGGAAGTATCCTCAATAAAAGAAATTTCAGAGAAAGCACTTGCCACTCTAGGGAACTTATCAGTGACTTTGATGGGAAAGAAAGCAATAGAGAACAATTCAATGGTGCCAGAAACCTTTATTGAGATCTTGTCATGGGAAGACAAACCCAAATGCCAAGAGTTGTCAGTGTATATTTTGATGATTCTTGCACATCAAAGCTCATTGCAAAGAAAGAAAATGGCACAGGCAGGAATTGTTCCGGTGCTTCTTGAAGTGGTTTTATTGGGGAGTAATTTGGCTCAGAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAAAGGCAAACGAAAATGGGTCCACATTCTGGTCCACAAACACCAAGATTTGCAATGGGGTCACCTGTGAATCAAAGAGAAGCAAAAGAAGGGAAGAGATTGATGAAGAGTTTGGTGAAACAAAGTTTAAATAGGAATATGGAAATAATAACGCAGAGGGCAAATGCAGCAGGGGAGTCTTCTAAATTGAAGTCTTTGATTATTAGCACTAGTTCCAAGAGTTTGCCTTACTAA 1515 0.4145 MCPVLPLYFKVHGALQIVSLIRFLSLLPLVSLCLQSQKQKLKLYKNQTPNTHFSKISISCFVFSFLSSMSTPSSSSSSSSIWVLSNIKLQFFGRIRRFLQSKATKKRYDPSDRFDTAKSKVEHNNKVENLETVQVMEKHKEEEEESVIMLQRTVKMLHFGSWEEKEVAAKEIEKLAKEDVKVRKLITELGVVPVLVSMVASPVASRRRAGLTALIHLADGTYTNKALIVEAGILSKLPKTIDLVDESTTSKLVELLLSLSSLANTQFPLAILDFLPLLRNILEKGSSFDTKNSCLGALHNLSTVLENACPLVSSGVVPILLEVSSIKEISEKALATLGNLSVTLMGKKAIENNSMVPETFIEILSWEDKPKCQELSVYILMILAHQSSLQRKKMAQAGIVPVLLEVVLLGSNLAQKRAMKLLQWFKDERQTKMGPHSGPQTPRFAMGSPVNQREAKEGKRLMKSLVKQSLNRNMEIITQRANAAGESSKLKSLIISTSSKSLPY* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2579 504 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 139 504 - -
Gso11g2579 504 SMART arm_5 179 219 IPR000225 GO:0005515
Gso11g2579 504 SMART arm_5 264 303 IPR000225 GO:0005515
Gso11g2579 504 SMART arm_5 304 342 IPR000225 GO:0005515
Gso11g2579 504 SMART arm_5 221 261 IPR000225 GO:0005515
Gso11g2579 504 Gene3D - 121 487 IPR011989 -
Gso11g2579 504 MobiDBLite consensus disorder prediction 431 456 - -
Gso11g2579 504 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 139 504 - -
Gso11g2579 504 SUPERFAMILY ARM repeat 154 423 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2579 Gso-Chr11 41834436 41837753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2579 149 442 U-box Gene Family AT1G67530 29.085 1.38e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2579 - - gmx:100813828 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0699 15 6258089 6261429 Gso11g2579 11 41834436 41837753 GST