Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2573 ATGCCGGACTTCCACGACTCCCTCCTCACCACCACGCCGCCGCCATCGCGCCCCGTCCCCGTCCGCGAGGACTGCTGGTCCGAGGAGGCCTCCTCCACGCTCGTCGACGCCTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAAAAGGACTGGCAGGACGTCGCCGACGCCGTCAACGCGCTCCACGGCCACACCAAAAAGACGCACCGCACCGACGTCCAGTGCAAAAACCGCATCGACACCATTAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGGCCTCCAACGGTACTCTCTCTTCCTCTTGGCCTTTCTACGAGCGCTTGGACGCTCTAATCGGCCCTAATTTTAGCGCGAAGAAATCAACCTCTTCGCCGTCTCCGTCGCCGCCGGTGGCTCTTCCTTTGCTGCCGCATCGGAAGAACCAGAACCAAAACCAGAACCCTTCCTCTTCTCCTGCGATTGCGGTGCCGCCGACGGCCGTCGCTCTGCCGCAGAAGCGCTCCTCGGCAGCGGCGATGGACGAGGGTTACTTCAGAAGGAATTACTCCGCCGTGGCTGCCGCGGCGGCGGCAGCGGAGGCTGATGAGGACGATGAGGAGGAAGACGAGGAGGAGGCGGAGGATTTGGAGGAGGAGGAGGAGGAAGAATGTGAAGAGGAAGGGAGAGGGAGCGAAGTGGAGGAAGGGGATAAGGAGAGGGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGGGAAGTTTATGAGAGAGTGGAGGCGCAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTGCAGAGGATGGAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGGTAAAAGATCTGGCTCTAATGATATGTATAGCTAG 939 0.5889 MPDFHDSLLTTTPPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSASNGTLSSSWPFYERLDALIGPNFSAKKSTSSPSPSPPVALPLLPHRKNQNQNQNPSSSPAIAVPPTAVALPQKRSSAAAMDEGYFRRNYSAVAAAAAAAEADEDDEEEDEEEAEDLEEEEEEECEEEGRGSEVEEGDKEREGMRRLAKAIERFGEVYERVEAQKLRQMVDLEKQRMQFAKDLEVQRMEMFMDTQVQLERIKRGKRSGSNDMYS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2573 312 MobiDBLite consensus disorder prediction 124 162 - -
Gso11g2573 312 Coils Coil 193 226 - -
Gso11g2573 312 MobiDBLite consensus disorder prediction 144 160 - -
Gso11g2573 312 PANTHER OS05G0560600 PROTEIN 9 308 - -
Gso11g2573 312 Gene3D - 26 92 - -
Gso11g2573 312 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 9 308 IPR044823 -
Gso11g2573 312 MobiDBLite consensus disorder prediction 194 241 - -
Gso11g2573 312 MobiDBLite consensus disorder prediction 198 229 - -
Gso11g2573 312 MobiDBLite consensus disorder prediction 1 22 - -
Gso11g2573 312 Pfam Myb/SANT-like DNA-binding domain 23 117 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2573 Gso-Chr11 41769717 41775181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2573 22 311 Trihelix Transcription Factor Family AT3G14180 33.148 9.91e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso11g2573 Myb_DNA-bind_4 8.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2573 - - gmx:100815241 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0706 15 6327671 6332908 Gso11g2573 11 41769717 41775181 GST