Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2563 ATGAAGAATCCCGTGGCCGAGAGTTTCACCGACTTCTACGACAAGTGGGTTTGGAAGCTCGAGGAGATCCTACACCAGCTCCTCGAGGTGTCCAAACAGAGAACTGAGGTGGTCAAAACTGAGCAAGAGCTGCAGGTTTTGGTGTCAAAAGTCACATCCCATTTGAAGGAATACTACACTATAAAGTGGGCATCCGCACATGAAGAGGTGCTTGTGTTCTTCTCGCCGGCGTGGTTGAGTCCTCTGGAGAATGCTTATTTGTGGATCACAGGGTGGAAGCCCTCCATGGTGTTCAAGCTTCTGGAAACTCTCAAGAAGCAAGCGAGTGGTGGTGATTTTGTGATGACGGAGGAGCAGGTGAGGAAGATCGAGGAGCTGAGGAAGAGGACGAGGATGGAGGAGGAGAAGGTGGAGAGGGAGATGGAGAGGCAGCAGGTGGCCATGGCTGACCGCAAGATGGTGGAGTTGGTCAAGCTCACCGGCAGAGCAAGGAACAACGGTAGTGGTGGTGGTGGTGATGCGGTGGATGCGGTGGTGGAGGTGGCCTTAAAAGGGGTTCTTGCGGGGTTGGAGAGGGTCATGAAGGCTTCGGATTGCGTGAGGCTCAAGACACTCAAAGGGGTGTTGGATGTGCTTAGTCCAATGCAGTGTGTCGATTTCTTGGCTGCAAATATTGCTATGCAGCTAAGACTCAGGCAATGGGGGAAGAAGAAGAGGGACATTGCTGCTGCAGGATCCACACTCAATGTGAATCAGGACAACTGA 765 0.5255 MKNPVAESFTDFYDKWVWKLEEILHQLLEVSKQRTEVVKTEQELQVLVSKVTSHLKEYYTIKWASAHEEVLVFFSPAWLSPLENAYLWITGWKPSMVFKLLETLKKQASGGDFVMTEEQVRKIEELRKRTRMEEEKVEREMERQQVAMADRKMVELVKLTGRARNNGSGGGGDAVDAVVEVALKGVLAGLERVMKASDCVRLKTLKGVLDVLSPMQCVDFLAANIAMQLRLRQWGKKKRDIAAAGSTLNVNQDN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2563 254 PANTHER - 1 241 - -
Gso11g2563 254 Coils Coil 120 152 - -
Gso11g2563 254 Pfam Seed dormancy control 29 102 IPR025422 GO:0006351|GO:0043565
Gso11g2563 254 ProSiteProfiles DOG1 domain profile. 6 241 IPR025422 GO:0006351|GO:0043565
Gso11g2563 254 PANTHER PROTEIN DOG1-LIKE 4 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2563 Gso-Chr11 41684906 41686129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2563 6 232 bZIP Transcription Factor Family AT3G12250 27.753 2.08e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2563 - - gmx:100808459 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0715 15 6421670 6422802 Gso11g2563 11 41684906 41686129 GST