Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2550 ATGAGGAGTACTTGTGATGAATGGAAACCTTTTATAGTAATGATAGCAATTGATTTTTCTTTTGCGGCAGTGAATATTCTTCTCAAGAAAGTCCTTGAAGAGGGAATGAACCATTTGGTTTTTATCACATACCGGCTGTCAATTGCTACCATTTTCATAGCCCCAATCTGCTACTTTAGGGAAAGAAACGACAGACCAAGGCTCACATTTCGAATTTTATGTTACCTATTCTGCAGTGCCATTGTTGGGGCATCAGTGACTCAATACTTTTTCCTTATGGGGATCCAATATACTTCTGCTACCTTTTCTTGTGCTTTCATCAACATGGTGCCTGTGGTCACATTCATGATGGCATTACCATTTGGGTTAGAGACCGTGAAAATCAAATGCAAAAGTGGGAGAGCTAAGATTCTTGGTTCATTGGTGTGCATAGGCGGCGCATTGATGTTGACACTTTACAAAGGCAAGCCACTGTTTAATTTTTCTCACTATGAATCTGTATCTCCTGTGGCCAACAGTTCTGCAGTGAATCTAGCTTCTACAAGGACAAAGGGAAAATGGACTATTGGTGTAATAGCGTTGGTTTTGGGAACCATCTTTTGGTCTTCTTGGTTTATTTTACAGTCAAAAATAAGCAAGAGATATCCATGCCAGTATTCTAGCACAGCCATCATGTCCTTCTTTGGGGCCATTCAATCAGCTGTTATTTGCTTCTTCACTGACCACAACTTGTCCATTTGGGTTCTCAAGGGAAAGATACAAATCATTGCTATTCTATATGCTGGGATGATTGGTTCGGGTTTGTGTTTTGTGGGCATGTCATGGTGTGTGAAGAAGAGAGGTCCTGTCTTTACTGCAGCATTCAGTCCTCTTGTTCAGATAATGGCAGCAATGATTGATATCCCTGTCTTGCATGAGCAGCTCCATCTTGGAAGTGTGATGGGGTCTATCTTGGTGATTATTGGATTGTACATTCTTCTATGGGGTAAGAGCATGGAAATGCAGAATCGTGTGGTCAAGTTAGTCCAAGAAGCTGAAGAAACCAAGGAGCAAGAACCGCAACCGCAAATACAACAGTTGACAGTGTATGTTCACGCAGAATCGTGTGATTCGCAGTGCCACTAA 1125 0.416 MRSTCDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFIAPICYFRERNDRPRLTFRILCYLFCSAIVGASVTQYFFLMGIQYTSATFSCAFINMVPVVTFMMALPFGLETVKIKCKSGRAKILGSLVCIGGALMLTLYKGKPLFNFSHYESVSPVANSSAVNLASTRTKGKWTIGVIALVLGTIFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICFFTDHNLSIWVLKGKIQIIAILYAGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPVLHEQLHLGSVMGSILVIIGLYILLWGKSMEMQNRVVKLVQEAEETKEQEPQPQIQQLTVYVHAESCDSQCH* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2550 374 PANTHER WAT1-RELATED PROTEIN 10 350 IPR030184 GO:0016021|GO:0022857
Gso11g2550 374 Coils Coil 331 351 - -
Gso11g2550 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Gso11g2550 374 PANTHER WAT1-RELATED PROTEIN 10 350 - -
Gso11g2550 374 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Gso11g2550 374 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Gso11g2550 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2550 Gso-Chr11 41541867 41544947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2550 6 335 Nodulin-like Gene Family AT1G11460 38.973 7.10e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2550 - - gmx:100803670 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0726 15 6537146 6539924 Gso11g2550 11 41541867 41544947 GST
Gso5g1361 5 37095168 37097851 Gso11g2550 11 41541867 41544947 PCT
Gso8g0984 8 9093236 9095965 Gso11g2550 11 41541867 41544947 PCT
Gso11g2550 11 41541867 41544947 Gso5g1361 5 37095168 37097851 PCT
Gso11g2550 11 41541867 41544947 Gso8g0984 8 9093236 9095965 PCT