Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2513 ATGGCAATTAAGAGCATCATTCCCGCAACTTATTTCCTACTCTTTCTCCACCTACTCCTTCCCTTAGCTTCATGCATCAAAACAAAGCAGGTTTATGTAGTTGAGTTGTTTGGAGATCACACTAGTGATGACAAAACACTGCATGAAGTTGAGAATAGCCATCACTCTTATTTGCTTTCGGTGAAAGAAACTGAGGAGGAAGCCCGAGCTTCCCTTCTTTATAGTTACAAGCACAGTATCAATGGCTTTGCAGCATTGCTTACCCCAAAAGAAGCTAATAAGCTCTCAGAAATGGAGGGAGTGGTCTTTGTGCATAAGAACCAGCCAAAGATCTACTCTTTGCACACCACAAGATCATGGAATTTCGTGGGGTTAGATGGGCCTTTAAATCCTTGGGAAGAAGAATCCGATCACACAGATGGAAACTTGCTAGCCAGAGCACAATATGGGAAAGACATCATAGTAGGAATGATTGATAGTGGTGTGTGGCCAGACTCAAAGAGCTTCAGTGATGAAGGGATGGAGCCAGTTCCAACAAAATGGAAAGGAGTGTGCCAAAATGGAACTGCTTTCGATTCGTCTCAATGTAATAGAAAGATCATTGGAGCACGTTACTACTTGCATGGTTACCAAAGTGCATTTGGCCCTCTTAACGAAAAAGAAGACTACAAATCAGCACGTGACAAAGATGGTCACGGAAGCCACACAGCTTCAATAGTTGCAGGGCGTGTAGTTCCAAATGCCTCAGCCATTGGAGGCTTCGCCAAGGGCACAGCCTTAGGAGGAGCCCCTTTGGCCCGTCTCGCCATATACAAAGCATGTTGGCCAATAAAGGGAAAGTCAAAACACGAAGGGAACATATGCACAAACATTGACATGCTTAAAGCAATAGATGATGCCATTGGTGATGGAGTTGATGTTCTAAGCATTTCCATAGGGTTCAGTGCACCAATTTCATATGAAGAGGATGTGATTGCTAGGGGTGCGTTGCATGCTGTGAGGAAGAACATTGTGGTTGTGTGTAGTGCTGGCAACTCTGGCCCTTTGCCTCAGACTTTGTCAAACCCTGCTCCATGGATCATCACTGTTGCTGCTAGCACTGTGGACCGTTCTTTTCATGCTCCAATTAAGCTCAGCAATGGAACAATTATTGAGGGTCGATCTATTACTCCACTCCACATGGGAAACAGCTTCTACCCATTGGTTCTAGCTAGAGATGTTGAACATCCAGGCTTGCCTAGTAACAATTCTGGGTTTTGCCTAGACAATACCCTTCAACCCAACAAGGCAAGGGGGAAGATAGTTCTCTGCATGAGAGGGCAAGGAGAAAGACTGAAAAAAGGCTTAGAAGTTCAAAGGGCAGGTGGGGTTGGTTTTATCCTTGGCAACAATAAACTAAATGGGAAAGATGTACCCTCTGATCCTCATTTTATTCCAGCCACTGGGGTGTCCTATGAGAATTCCTTAAAACTTATTCAATATGTTCATTCTACTCCAAATCCAATGGCACAAATTCTACCAGGAACAACAGTGTTAGAAACCAAACCAGCACCCTCCATGGCCTCCTTCTCTAGCAGGGGTCCAAATATAGTTGACCCCAATATTCTGAAGCCTGACATTACAGCCCCAGGAGTAGACATATTGGCAGCATGGACCGCTGAAGATGGCCCCACAAGAATGACATTTAACGACAAACGAGTGGTTAAATACAACATCTTCTCTGGAACTTCAATGTCATGCCCTCATGTTGCTGCTGCAGCTGTTCTTCTCAAAGCCATACACCCTACATGGAGCACTGCTGCTATAAGATCTGCCCTGATGACTACAGCCATGACAACAGACAACACAGGTCATCCATTGACTGATGAAACTGGAAATCCGGCGACGCCTTTCGCAATGGGGTCTGGCCACTTCAACCCCAAAAGAGCAGCAGATCCTGGACTGGTTTATGATGCCTCCTACATGGGCTACCTTCTTTACACTTGTAACCTTGGAGTAACTCAAAACTTTAACATTACATATAACTGTCCAAAGTCATTTCTTGAACCCTTTGAGCTCAACTATCCATCCATACAAATCCATAGACTCTATTACACTAAGACTATAAAGAGGACAGTCACCAATGTTGGTAGGGGCAGGAGTGTTTACAAGTTTAGTGCGGTGTCACCAAAGGAATACTCCATCACAGCCACTCCAAACATTCTGAAATTTAATCATGTTGGGCAGAAAATTAACTTCACCATCACAGTGACAGCAAATTGGAGTCAGATACCAACCAAGCATGGCCCAGATAAGTACTATTTTGGATGGTATGCATGGACTCACCAACATCACATTGTAAGAAGCCCGGTGGCAGTGTCTTTTCCATAA 2370 0.4439 MAIKSIIPATYFLLFLHLLLPLASCIKTKQVYVVELFGDHTSDDKTLHEVENSHHSYLLSVKETEEEARASLLYSYKHSINGFAALLTPKEANKLSEMEGVVFVHKNQPKIYSLHTTRSWNFVGLDGPLNPWEEESDHTDGNLLARAQYGKDIIVGMIDSGVWPDSKSFSDEGMEPVPTKWKGVCQNGTAFDSSQCNRKIIGARYYLHGYQSAFGPLNEKEDYKSARDKDGHGSHTASIVAGRVVPNASAIGGFAKGTALGGAPLARLAIYKACWPIKGKSKHEGNICTNIDMLKAIDDAIGDGVDVLSISIGFSAPISYEEDVIARGALHAVRKNIVVVCSAGNSGPLPQTLSNPAPWIITVAASTVDRSFHAPIKLSNGTIIEGRSITPLHMGNSFYPLVLARDVEHPGLPSNNSGFCLDNTLQPNKARGKIVLCMRGQGERLKKGLEVQRAGGVGFILGNNKLNGKDVPSDPHFIPATGVSYENSLKLIQYVHSTPNPMAQILPGTTVLETKPAPSMASFSSRGPNIVDPNILKPDITAPGVDILAAWTAEDGPTRMTFNDKRVVKYNIFSGTSMSCPHVAAAAVLLKAIHPTWSTAAIRSALMTTAMTTDNTGHPLTDETGNPATPFAMGSGHFNPKRAADPGLVYDASYMGYLLYTCNLGVTQNFNITYNCPKSFLEPFELNYPSIQIHRLYYTKTIKRTVTNVGRGRSVYKFSAVSPKEYSITATPNILKFNHVGQKINFTITVTANWSQIPTKHGPDKYYFGWYAWTHQHHIVRSPVAVSFP* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2513 789 CDD Peptidases_S8_3 112 610 IPR034197 -
Gso11g2513 789 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 786 IPR045051 -
Gso11g2513 789 Pfam Peptidase inhibitor I9 31 108 IPR010259 -
Gso11g2513 789 ProSitePatterns Serine proteases, subtilase family, serine active site. 575 585 IPR023828 -
Gso11g2513 789 ProSiteProfiles Serine proteases, subtilase domain profile. 131 644 - -
Gso11g2513 789 Pfam Fibronectin type-III domain 685 786 IPR041469 -
Gso11g2513 789 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 115 IPR037045 -
Gso11g2513 789 Gene3D - 658 788 - -
Gso11g2513 789 SUPERFAMILY Subtilisin-like 115 648 IPR036852 GO:0004252|GO:0006508
Gso11g2513 789 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 24 786 - -
Gso11g2513 789 PRINTS Subtilisin serine protease family (S8) signature 150 169 IPR015500 -
Gso11g2513 789 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Gso11g2513 789 PRINTS Subtilisin serine protease family (S8) signature 574 590 IPR015500 -
Gso11g2513 789 Gene3D Peptidase S8/S53 domain 152 657 IPR036852 GO:0004252|GO:0006508
Gso11g2513 789 Gene3D - 369 512 - -
Gso11g2513 789 CDD PA_subtilisin_like 376 505 - -
Gso11g2513 789 Pfam Subtilase family 150 636 IPR000209 GO:0006508|GO:0008236
Gso11g2513 789 Pfam PA domain 400 489 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2513 Gso-Chr11 41172670 41180394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2513 23 788 Subtilisin-like Serine Gene Family AT5G45650 57.143 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2513 - - gmx:100793064 1609.73