Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2510 ATGGTTGTAGAAGATACCCAAAAGTCAGTCATCACGGAGGACCAATACCCTAGCAGGGTCGTCAGCGACAACAACAACGACGACGACGACGATGATCTCGAAGAGGGTGAGATCCCCGTCGACGGCGAAGATAGCGGCGCCACCGCCACAACGAAGCCTCCGGCCGCCCTCGCCCGAAACCCCCACCCTCTGGAGAATTCCTGGACCTTCTGGTTCGACAACCCTTCCTCCAAGTCCAAACAAGCCGCATGGGGCAGCTCCATCCGACCCATCTACACTTTCGCCACCGTTGAAGAGTTTTGGAGCATTTACAATAACATTCACCACCCGAGCAAGTTGGGTTTGGGGGCGGACTTTCACTGCTTCAAGCACAAGATTGAGCCAAAGTGGGAGGACCCTATCTGCGCCAATGGGGGAAAGTGGACTATGACCTTCCCAAGGGGAAAATCTGATACCAGTTGGTTGTATACGTTGTTGGCGATGATTGGAGAACAGTTTGATCACGGAGATGAAATATGTGGAGCTGTTGTGAATGTCAGAAGTAGGCAGGATAAAATTGCTATTTGGACTAAGAACGCTTCAAATGAAGCTGCTCAGGTGAGCATTGGAAAGCAGTGGAAGGAGTTTCTTGATTACAATGACACAATTGGCTTTATATTTCATGAGGATGCAAAGAAGCTGGACAGAGGTGCTAAAAATAAATACGTTGTATGA 714 0.4958 MVVEDTQKSVITEDQYPSRVVSDNNNDDDDDDLEEGEIPVDGEDSGATATTKPPAALARNPHPLENSWTFWFDNPSSKSKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLGLGADFHCFKHKIEPKWEDPICANGGKWTMTFPRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRSRQDKIAIWTKNASNEAAQVSIGKQWKEFLDYNDTIGFIFHEDAKKLDRGAKNKYVV* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2510 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 237 - -
Gso11g2510 237 ProSitePatterns Eukaryotic initiation factor 4E signature. 118 141 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Gso11g2510 237 Pfam Eukaryotic initiation factor 4E 63 214 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gso11g2510 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 237 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gso11g2510 237 SUPERFAMILY eIF4e-like 58 233 IPR023398 -
Gso11g2510 237 MobiDBLite consensus disorder prediction 1 22 - -
Gso11g2510 237 MobiDBLite consensus disorder prediction 25 41 - -
Gso11g2510 237 Gene3D RNA Cap, Translation Initiation Factor Eif4e 54 237 IPR023398 -
Gso11g2510 237 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2510 Gso-Chr11 41134664 41137233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2510 1 237 Eukaryotic Initiation Factors Gene Family AT4G18040 66.390 3.49e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2510 K03259 - gmx:100499636 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0762 15 6900378 6902456 Gso11g2510 11 41134664 41137233 GST