Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2487 ATGGAGACTGGTGGTGGACGCGATTCTGGCATGAGTTCTGAGACTATCAATTCCTCCACTCAAAGAACTTCAATGAGCAACGAGAGCGTTTGCAGCACCAGCTTCAGCCGTCTCTCCTTCGATCTCCCTCCTCCTTCTTCTTCCCCTGAGACCCTCTTCGTCAAACCCCACCGCTCCTCCGACTTCGCCTACTCCGCCATCCTCCGCCGCAAGTCCGCCCTCACCTTCCGCGACTTCCACCTCCTCCGCCGCATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGTCTCCGCCACGACGCCGGCGACGAGGACGACGACGAGGACCCCTGTTTCTACGCGATGAAGGTGGTGGACAAGGAGGCGGTGGCGCTGAAGAAGAAGGCGCAGAGAGCGGAGATGGAGAGGAAGATTCTGAAGATGGTGGACCATCCGTTCCTCCCTACGCTCTACGCGGAGTTCGAGGCTTCGAATTTCTCATGCATTGTGATGGAGTATTGCTCCGGTGGGGACTTGCACTCCCTTCAACACAACCACCCCAATAACCGATTCTCTCTCTCCTCTGCCAGGTTTTACGCGGCTGAAGTACTGGTTGCGTTGGAGTATCTCCACATGCTGGGAATCATCTACAGGGATCTGAAGCCCGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCCGACTTCGATCTCTCTCTATGCTCCGATGCTATCCCAGCCGTTGAATCCCCTGACTGTTCACTGGACCCCGCATTCGCACCCGCGTTACGCTACACTCGCCAGTACTCCACCCCCTTCTCCTGCCTCTCGAACCGCGTATTCCGGTCCAGGAAGGTCCAGACCCTCCAACCCAACCGCCTCTTCGTGGCCGAACCGGTCGGGGCCCGCTCGTGCTCCTTCGTTGGGACCCACGAGTACGTGTCGCCGGAAGTGGCCTCCGGGAACTCACACGGCAATGCCGTCGACTGGTGGTCCTTCGGGATATTCATCTACGAGATGGTGTACGGTCGAACACCCTTCGCGGGATCATCGAACGAGGCTACGCTGCGAAGCATCATCAAAAAGCCCCTCGCATTTCCCACCTCCACGCCCTCCAGTACGCTTGAAATGCACGCGCGGGACCTCATATCAGGGTTGCTCAACAAGGACCCGAACCGCAGGCTCGGGTCCAAACGAGGCTCTGCGGACGTCAAAAAACACCCCTTCTTCGCGGGGCTCAATCTCGCGCTCATCCGGACGGTCACGCCGCCGGAGGTTCCATCACTCAGAAGGAATAAAACGACGCCGTTTTACTACCCCGCCAACGATAACGGCAACGTAAATAACAGTAGACAGCAGCTAACGGCGTTTGATTACTTTTGA 1371 0.5784 METGGGRDSGMSSETINSSTQRTSMSNESVCSTSFSRLSFDLPPPSSSPETLFVKPHRSSDFAYSAILRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRHDAGDEDDDEDPCFYAMKVVDKEAVALKKKAQRAEMERKILKMVDHPFLPTLYAEFEASNFSCIVMEYCSGGDLHSLQHNHPNNRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESPDCSLDPAFAPALRYTRQYSTPFSCLSNRVFRSRKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGRTPFAGSSNEATLRSIIKKPLAFPTSTPSSTLEMHARDLISGLLNKDPNRRLGSKRGSADVKKHPFFAGLNLALIRTVTPPEVPSLRRNKTTPFYYPANDNGNVNNSRQQLTAFDYF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2487 456 Gene3D Phosphorylase Kinase; domain 1 79 431 - -
Gso11g2487 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Gso11g2487 456 PANTHER FLIPPASE KINASE 1-RELATED 4 454 - -
Gso11g2487 456 CDD STKc_phototropin_like 77 427 - -
Gso11g2487 456 Pfam Protein kinase domain 79 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2487 456 Pfam Protein kinase domain 301 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2487 456 MobiDBLite consensus disorder prediction 1 28 - -
Gso11g2487 456 SMART serkin_6 79 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2487 456 SUPERFAMILY Protein kinase-like (PK-like) 59 430 IPR011009 -
Gso11g2487 456 Coils Coil 116 136 - -
Gso11g2487 456 Gene3D Transferase(Phosphotransferase) domain 1 172 424 - -
Gso11g2487 456 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 4 454 - -
Gso11g2487 456 ProSiteProfiles Protein kinase domain profile. 79 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2487 Gso-Chr11 40957050 40959717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2487 8 456 AGC Kinase Gene Family AT2G34650 66.667 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso11g2487 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2487 - - gmx:100795536 878.626