Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2477 ATGAGGAGGAACTGCAACTTGGAACTTGCCCTTTTTCTTCCCTCTGATTCTGGCCCCCGCCACCACCACTCAATGGTTGAAGAAGCTAGTGAAATAAGCCCAATCCAAAATTTCTTCCATCACCACCACCGCCAGGAACAGCAACAGCAACAGCCGCTCACCATTTTCTATGATGGAAATATTTGTGTTGCGGATGTCACAGAGCTTCAGGCCAAATCGATTTTATTGCTTGCAAATAGAAAATTGGAGGAAAGAGTGAGGACACCAACTGGGTCAGAGCCATCTTCACCAGCAGTGATGCAATCTAACAATCAATTGTATAGTCCTGGCACTGGCCTTTCCATGAGAAAATCGTTGCAAAGGTTCCTTCAGAAGAGAAAGAATCGGGTCCAAGAAGCATCGCCATACCATCACTAG 417 0.4604 MRRNCNLELALFLPSDSGPRHHHSMVEEASEISPIQNFFHHHHRQEQQQQQPLTIFYDGNICVADVTELQAKSILLLANRKLEERVRTPTGSEPSSPAVMQSNNQLYSPGTGLSMRKSLQRFLQKRKNRVQEASPYHH* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2477 138 PANTHER - 1 138 - -
Gso11g2477 138 MobiDBLite consensus disorder prediction 89 112 - -
Gso11g2477 138 Pfam tify domain 47 79 IPR010399 -
Gso11g2477 138 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 138 IPR040390 -
Gso11g2477 138 SMART tify_2 46 80 IPR010399 -
Gso11g2477 138 Pfam Jas motif 116 136 IPR018467 -
Gso11g2477 138 ProSiteProfiles Tify domain profile. 46 80 IPR010399 -
Gso11g2477 138 MobiDBLite consensus disorder prediction 82 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2477 Gso-Chr11 40840341 40843568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2477 1 137 Tify Gene Family AT1G30135 41.727 2.49e-25 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gso11g2477 tify 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2477 - - gmx:100500349 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0788 15 7204147 7207065 Gso11g2477 11 40840341 40843568 GST