Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2475 ATGAATACTTCTTCAGCTTTCGATAAAGAAAATGCTAAGGGGAAAGAGAAATGCAATTGTTGCTCTTATTGTGACAGAGCATTTGACAATTATGAAGGTCTTGAAGATCATAAAAAAATGCATGAAGCTGAGTTTAAGCGACTTGTCAATCAAAGCAATCCTTTTCATAATTCAATGGATATCACCAAGCCCATTTTTGGTTATGGAAATGTCTCAATGAAAACTTTGTATGGAGGTACAACAATCAATCCTTGTGTAACAAAAGGAAATTGTTATGGTGACAATAACAGAGGAGACCATAATTCATTGTTCATGACTTCAAGTTATTCTTTTACAAGAACCAACAATGCATCCTTGGTAGCGTCACTTCCAAATAAGGAGATTGATCCTTGTGTAATGAAAGGAAATTGTTATGGTGGTAATAGCCGAGGAGACCATAATTCATTGTTCATGCCATCAAATTATTCTTTTACAAGTAGCAACAATGCATCCTTGGTAGCGCCAATTCCAACTAAGGGGATTCCTTGTGTAACAAAAGGAAATTGTTATGGTGGTAATAGCCAAGGAGATCGTAATTCATTGTTCATACCTCCAAATTATTCTTTTACAAGAACCAACAATGAATCCTTGGTAGCAACAATTCCAACTAAAGGGACCATTCCTTTTTCTCAGTATGTGAACCATCCAATTTATATGGGTTCCTCTAATAATTATATAGGTCACACACCAAGTGCAAGTTCTGGTATAAGTCATCAATTTGATGCTAGCAATTCGCAATTTTTTATTGATGATTTTACCATACCTTTTAGAAGCAAATTTCAAAATATCAAACCTAATGGTAGCCATCTTCCATATCCAATCTCTGTTAGAAATCCTTCTTTACCAGGTTATCACATGACTGAACGTGGTTTATCCATATTCCCTTATTCTATTAAGCCTTTTTTTGTTGATACCCAAACACACTCTATTAGCTTAAACAATATTCACCAAATTTATGAGAGAGTGAAAAAACACAATAGAGATGAAGTCCAAGAAAAAAGTTCAATGATGAATCCACCCAAAAGGCCCAATATCAACTACGGTCCACTTGTCTGTCATGAAAGAGAGATGCTACAAAAGAATGAATCACTTTTTTCTACCAAAGATGCCAAGCTTAAAGCTATAGGTGCAATTGTCTTCAATGATGAAGGAAAGATTGGTTCTACTTCAGAGAGCAAAAATAATACAAAAGAACAAGAAGATGATGATTTGGATCTTTCCCTTCATTTATAG 1272 0.3467 MNTSSAFDKENAKGKEKCNCCSYCDRAFDNYEGLEDHKKMHEAEFKRLVNQSNPFHNSMDITKPIFGYGNVSMKTLYGGTTINPCVTKGNCYGDNNRGDHNSLFMTSSYSFTRTNNASLVASLPNKEIDPCVMKGNCYGGNSRGDHNSLFMPSNYSFTSSNNASLVAPIPTKGIPCVTKGNCYGGNSQGDRNSLFIPPNYSFTRTNNESLVATIPTKGTIPFSQYVNHPIYMGSSNNYIGHTPSASSGISHQFDASNSQFFIDDFTIPFRSKFQNIKPNGSHLPYPISVRNPSLPGYHMTERGLSIFPYSIKPFFVDTQTHSISLNNIHQIYERVKKHNRDEVQEKSSMMNPPKRPNINYGPLVCHEREMLQKNESLFSTKDAKLKAIGAIVFNDEGKIGSTSESKNNTKEQEDDDLDLSLHL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2475 423 ProSitePatterns Zinc finger C2H2 type domain signature. 20 41 IPR013087 -
Gso11g2475 423 MobiDBLite consensus disorder prediction 407 423 - -
Gso11g2475 423 Coils Coil 31 51 - -
Gso11g2475 423 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 46 IPR013087 -
Gso11g2475 423 MobiDBLite consensus disorder prediction 398 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2475 Gso-Chr11 40821397 40823048 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso11g2475 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2475 - K09228 gmx:102668744 885.945