Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2468 ATGTCGGTTTCTTGTGTTAAAAACTTCTTCCAGAGGTTCTGGCAAGATGAATTTCAAACGGGAAATATTCCCCATGGAAGCTTTTTGGCCAATGATGATCTCCTTCCATCTCTTGGAGCTAGGATAAACCAGGAAACTAGACTTAGAAGATACATAATCTCTCCTTTCCATCCTCGCTATAGGGCTTGGGAGTTGGTACTGGTTGTTCTAGTCATATACTCAGCTTGGATTTGCCCATTTGAGTTTGCATTTCTTCCTTACAAGGAAAATGCTCTATTCATCGCAGACAACATTGTCAATGGCTTCTTTGCCATTGACATAGTGTTGACATTCTTTGTTGCATACCTTGATCGCCATTCTTATCTTCTTGTTGATGATCCAAAGAAGATTGCGATCAGGTACATATCTACCTGGTTTGCTTTTGATGTCTGCTCAACAATACCATTTCAATCCTTCAGCTTCCTCTTCAATCATAGCAGTGAACTTGGCTTCAAAGTTCTTAACATGTTTCGGTTATGGAGGTTGAGACGAGTCAGTTCTCTGTTTGCAAGACTTGAAAAGGACATTCGCTTCAATTATTTTTGGACTAGGTGCACAAAGCTCATTGCTGTGACCTTGTTTACGGTGCATTGTGCGGGATGCTTTAACTATCTTATTGCAGATAGGTATCCAGATTCCAAAAGAACATGGATTGGTGCAGTGTACCCAAATTTTAAAGAAGAAAGTCTTTGGGACAGATATGTCACTGCAATATACTGGTCCATTGTCACTCTTACTACCACTGGCTATGGGGATTTACATGCTGAGAACACGAGAGAGATGCTGTTTGATATAGCTTACATGCTCTTCAACTTGGGTTTAACATCATACATCATTGGAAACATGACTAACCTTGTAGTCCACTGGACCAGCCGTACCAGAAATTTTAGGGACACAGTGAAAGCAGCTTCTGAATTTGCTTCAAGAAATCATTTGCCTCATCGCATTCAGGATCAAATGTTGTCACATATATGTTTGAGGTTCAAAACAGAAGGACTGAAGCAGCAAGAAACATTGAATGATCTTCCAAAGGCAATTCGTTCAAGCATTGCACACCATCTGTTTTTCCCTGTCGTGCAAAAGGTCTACCTTTTCCAAGGAGTCTCACATGATTTCCTTTTCCAACTGGTTTCAGATATGGAAGCTGAGTATTTCCCACCCAAGGAGGATGTGATACTGCAAAACGAGTCTTCCACAGAACTTTATGTGCTGGTTTCTGGGGTAGTGGATCTGGTTCGCTACATCGATGGGCATGATCATGTTCATGGGAAGGCAGCTGCAGTAGATGCATTTGGAGAGATTGGAGTTTTATATCATATACCACAGCCTTTCACAGTTCGGACCACAGAACTTTCTCAGATTTTAAGAATCAACAAAACATCCTTAATGAATGTCTTACACGCAAATCCAGGAGATGCACAAATTATAATGGATAACCTTTTAATGAGATTAAAGGGGCGTGAAGGTTTTGGCTTTGAATATCCATGCACAGATTCTGGACGGTTTCCACATGAAGTGCTTCAAGGAGGTAACACGAGAGGAGGCCCTTCTCATGAGTGTACAAATAATTCACTTGAGCATTCATTAATGCATGAAGGAGAGTGCATATATATAGGAAACTCGGAGACCAGTTTGCATAAGGGGACCAATGATGATCATTTAGTCAGCAAACATAACATGATCCCTGAGCATGGTAGAAGAGATATTCATGCCCCTGCAAATAAAGGGAATCTAGACATTGTTGAAATTCTGCTTGAAAGAGATGCATATCCTATCCCAAATTCCTTAGGGATGACACAAAAAGCTCAAGTAAAACGGCCAAAAAACAAGAGCATTTGTGCCCAAAAAATGAGTTGTGAAAATGAGAAGTTAGATGAATTTAGAATACAGATAGCAGAGCCAAAAATCCTTGACCTTGACAGGAATGGCTCGACCAGAAACAGAAGACAAGATGGTATTAGATCTATCAAGTTCCCATTAGAGAAAACAAACACAAACTCCAATTCAAGAAATTCTAACTGTCCAAGTGATAGAGAATCGGCAAGGCTCACCAAGAAGAGAGTAACAATCCATTTGCTACACAGCGGGAGTACCTCACGAGGTCAGCATGGAAAATTAATAATCCTGCCTGATTCATTAGAAGAGCTGCTCCAAATTGCTGGTGACAAATTTGGTGGCTTCAACCCTACAAAAGTAATTAATACAGAGAATGCAGAGATAGATGACATAAATGTCATCCGGGATGGAGATCACCTCTTTCTTCAGTGCAGCAATAATGAAGATTTGAGTTCATGA 2334 0.4045 MSVSCVKNFFQRFWQDEFQTGNIPHGSFLANDDLLPSLGARINQETRLRRYIISPFHPRYRAWELVLVVLVIYSAWICPFEFAFLPYKENALFIADNIVNGFFAIDIVLTFFVAYLDRHSYLLVDDPKKIAIRYISTWFAFDVCSTIPFQSFSFLFNHSSELGFKVLNMFRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFTVHCAGCFNYLIADRYPDSKRTWIGAVYPNFKEESLWDRYVTAIYWSIVTLTTTGYGDLHAENTREMLFDIAYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVKAASEFASRNHLPHRIQDQMLSHICLRFKTEGLKQQETLNDLPKAIRSSIAHHLFFPVVQKVYLFQGVSHDFLFQLVSDMEAEYFPPKEDVILQNESSTELYVLVSGVVDLVRYIDGHDHVHGKAAAVDAFGEIGVLYHIPQPFTVRTTELSQILRINKTSLMNVLHANPGDAQIIMDNLLMRLKGREGFGFEYPCTDSGRFPHEVLQGGNTRGGPSHECTNNSLEHSLMHEGECIYIGNSETSLHKGTNDDHLVSKHNMIPEHGRRDIHAPANKGNLDIVEILLERDAYPIPNSLGMTQKAQVKRPKNKSICAQKMSCENEKLDEFRIQIAEPKILDLDRNGSTRNRRQDGIRSIKFPLEKTNTNSNSRNSNCPSDRESARLTKKRVTIHLLHSGSTSRGQHGKLIILPDSLEELLQIAGDKFGGFNPTKVINTENAEIDDINVIRDGDHLFLQCSNNEDLSS* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2468 777 Pfam Ion transport protein 61 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso11g2468 777 Gene3D Jelly Rolls 370 501 IPR014710 -
Gso11g2468 777 MobiDBLite consensus disorder prediction 674 694 - -
Gso11g2468 777 CDD CAP_ED 377 490 IPR000595 -
Gso11g2468 777 PANTHER POTASSIUM CHANNEL AKT1 1 777 IPR045319 GO:0005249|GO:0006813
Gso11g2468 777 Gene3D Helix hairpin bin 301 367 - -
Gso11g2468 777 MobiDBLite consensus disorder prediction 674 691 - -
Gso11g2468 777 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 777 - -
Gso11g2468 777 ProSiteProfiles KHA domain profile. 700 777 IPR021789 -
Gso11g2468 777 Gene3D - 61 300 - -
Gso11g2468 777 Pfam KHA, dimerisation domain of potassium ion channel 699 767 IPR021789 -
Gso11g2468 777 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Gso11g2468 777 PRINTS EAG/ELK/ERG potassium channel family signature 73 80 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso11g2468 777 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso11g2468 777 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso11g2468 777 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso11g2468 777 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso11g2468 777 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso11g2468 777 SMART cnmp_10 377 494 IPR000595 -
Gso11g2468 777 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Gso11g2468 777 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Gso11g2468 777 SUPERFAMILY Voltage-gated potassium channels 55 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2468 Gso-Chr11 40699236 40703922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2468 1 772 Ion Channels AT4G18290 58.408 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2468 K21867 - gmx:100783528 1580.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0801 15 7344703 7349222 Gso11g2468 11 40699236 40703922 GST