Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2453 ATGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAGGAGGGCAGTGGTGGTGGGGTGAGGGTCAAGGAGGTTCCCAACAAAGATTCTTCTTTTAAGGAAGCTGCTTCTGTTGTTCCTCAGTCTCACCTCCCCAGCAGGGTTAACTCAGATAAATCAAAATCACGAAATGGCGCTGATATTAAGAAGGACACACCGGTTCCAAAGGATGGCCCAACGGCCCATATTGCTGCACAAACATTTACATTCCGAGAGCTTGCAGCTGCTACAAAGAACTTTAGACCAGAATGTTTATTAGGCGAAGGAGGTTTTGGGCGTGTTTACAAAGGTCGCCTTGAGAGCACAGGGCAAGTAGTTGCTGTAAAACAGCTTGACCGAAATGGTCTTCAAGGAAATCGAGAGTTTTTGGTGGAAGTTCTTATGCTCAGTCTCTTGCATCATCCAAATCTTGTGAACTTAATTGGTTATTGTGCTGATGGTGATCAGCGGCTGCTTGTTTATGAATTCATGCCATTGGGATCTTTGGAGGATCATTTACATGATCTTCCTCCAGACAAGGAGCCTCTGGACTGGAACACTAGGATGAAAATAGCAGCTGGAGCTGCAAAGGGATTGGAATATTTGCATGACAAGGCAAATCCGCCAGTGATATATAGAGACTTAAAATCGTCCAACATCCTCCTAGACGAGGGTTATCATCCCAAGTTATCAGATTTTGGGCTGGCAAAACTTGGTCCAGTTGGTGACAAGACTCATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCCCCAGAATATGCTATGACTGGTCAACTAACTCTGAAATCTGATGTCTATAGTTTCGGTGTTGTCTTCCTTGAACTCATTACTGGGCGCAAGGCTATTGATAATACGCGTGCACATGGAGAGCATAATCTTGTTGCATGGGCACGGCCGCTTTTCAAAGACCGTAGGAAGTTCCCCAAAATGGCTGACCCTCTACTTCAAGGCCGTTACCCGATGCGAGGACTGTACCAAGCACTTGCAGTTGCTGCAATGTGTCTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGAGATGTGGTGACTGCTCTCACATATCTGGCCTCACAGACATACGAACCAAATGCAGCCAATCAATCCAACAGGGTTGGCCCATCAACCCCTAGGATCAGGGATGACAGAAGGAGCATGGCAGACGGTGTGGACAGCCCTGACCGCCGGCTCGGCTCCCCTTCCACCCACAGAAACTCACCCGACTTCAGGAAGAGAGACAGCAGGGATCCGAGTGCCGCGACCGAGTTAGGCAGGATTGACATCGGTGGGGGGTCAGGGAGAAAATGGGGATTGGATGATAATGAAAGGCAGGAGTCCCAGAGAGACAGCCCTGTAAATACTGCAAGAACCAGAGAGACTCCATGGAACCGCGACCTGGACAGAGAGCGTGCGGTTGCAGAGGCAAAAGTGTGGGGCGAGAACTTGAGAGAGAAGAAGAAGGCAAACGCCATGGGTAGCTTCGATGCTACAAATGACTGA 1542 0.4857 MGGCFPCFGSSNKEGSGGGVRVKEVPNKDSSFKEAASVVPQSHLPSRVNSDKSKSRNGADIKKDTPVPKDGPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYEPNAANQSNRVGPSTPRIRDDRRSMADGVDSPDRRLGSPSTHRNSPDFRKRDSRDPSAATELGRIDIGGGSGRKWGLDDNERQESQRDSPVNTARTRETPWNRDLDRERAVAEAKVWGENLREKKKANAMGSFDATND* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2453 513 MobiDBLite consensus disorder prediction 1 72 - -
Gso11g2453 513 PANTHER OS07G0668900 PROTEIN 1 507 - -
Gso11g2453 513 SUPERFAMILY Protein kinase-like (PK-like) 75 367 IPR011009 -
Gso11g2453 513 Pfam Protein kinase domain 98 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2453 513 SMART serkin_6 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2453 513 MobiDBLite consensus disorder prediction 419 434 - -
Gso11g2453 513 MobiDBLite consensus disorder prediction 378 483 - -
Gso11g2453 513 MobiDBLite consensus disorder prediction 390 405 - -
Gso11g2453 513 CDD STKc_IRAK 99 368 - -
Gso11g2453 513 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g2453 513 Gene3D Phosphorylase Kinase; domain 1 65 169 - -
Gso11g2453 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Gso11g2453 513 MobiDBLite consensus disorder prediction 49 69 - -
Gso11g2453 513 MobiDBLite consensus disorder prediction 34 48 - -
Gso11g2453 513 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Gso11g2453 513 Gene3D Transferase(Phosphotransferase) domain 1 170 388 - -
Gso11g2453 513 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2453 Gso-Chr11 40531527 40540165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g2453 4 372 Glycoside Hydrolase AT3G07070 65.135 5.38e-172 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso11g2453 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2453 - - gmx:100783535 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0817 15 7514947 7520484 Gso11g2453 11 40531527 40540165 GST